| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xfasm12_0629 |
|---|
| Symbol | |
|---|
| ID | 6120393 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylella fastidiosa M12 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010513 |
|---|
| Strand | + |
|---|
| Start bp | 689395 |
|---|
| End bp | 690657 |
|---|
| Gene Length | 1263 bp |
|---|
| Protein Length | 420 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 641648698 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001775263 |
|---|
| Protein GI | 170729830 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2966] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.000000000973837 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCTTCTG CCCCTCTTCT TTCACCTGCC CTTTCCACCA GCTATGCACA GCGTGTTGCG
TTTGTCGCTG AGATTGCCGG ACGCCTCCAT ACATATGGCA CCACCGCACA GCGGCTGGAG
GCATCTTTGG TGGCGCTGAG CCAGCAACTT GGATTGGATT GTGAACCATG GTCCAATCCA
ACGGGTATCA TTCTCAGCTT TAGTGATCCA GCCAAGGCAA TCGGTTCAAG TGATATTACC
CGCGTGATCC GGTTGGCACC GGGGGATAAC GACTTGTACA AGCTCAGCGT GGCTGACAAT
GTTGCTCAAG CAGTTGCTTC TGGACGCATG AGTATCTCTC AGGGACACAC TACATTGCGC
CGCTTGGATC GTGAGTTGGA TCGACGTTCC AAGATGATGC GCGTGTTCGG TTTCGGGCTG
GCTGCTGGTG GTGTTGCTGG GTTATGGAAG CTGCCGTGGC TGGATGTCGC TACTGCTGCG
ATGGTTGGTT TGCTGATTGG CCTGCTGACA CAGTATACCG ATCACCGTGC CGCGACTCGT
GAGGCCAGTG AGGCATTGGC CGCGTTGCTG GCTGGTTTTG TTGCGACGTT GGTAGCCACG
CTGATTGGTC CGATCAATCT GAATACGGTG ATTATTGCTT CGGTGGTGGT ATTACTGCCA
GGTATGTCAC TGACAAACGC TGTGAACGAA TTATCAAGTC AGCATTGGGT CTCAGGTACA
GCGCGGTTGG CTGGTGCATT GACTGTGGTA TTCAAGCTTA CAGTCGGGGC TTTGATCGCA
GTGAGTTTGT GCAAGCTGAT TGGGCTAAAA CCGCAAATAT ACGTAGCGCA GCCTCAACCG
CAATGGGTTG AATGGGTGGC ATTGTTGACC ACCGCGTATG GGTTTGCTGT GCTGTTCAAG
GCACGCTTTC GCGATTACCC ATGGGTGATG GCGGCTGCTA TGGCTGGTTA TGTGATCGCA
CGCTATGCCG GGAAATTAAG TGGTAATGCC GAAGAAGGTG TTTTCCTGTC AGCAATGGTA
CTGACTGCAG CAGGCAATTT GTTTGGCCGT TTAATGCCCA AACCTGGCGC CTTGATCCGC
TTGCCAGGCA TCATCATGTT GGTACCAGGG AGTACCAGTA TGCGTGGATT TATGGATGTG
GTTGAACATC AAAGCATCCA TGTTGGCCAG GACGAATTGC TAGGCGTAAC GAATGTGGTG
ATGGCGCTTG TGGCTGGTTT GCTGTTTGGT AACCTCCTGA TACCAACGCG TAAGAACCTG
TAG
|
|---|
| Protein sequence | MSSAPLLSPA LSTSYAQRVA FVAEIAGRLH TYGTTAQRLE ASLVALSQQL GLDCEPWSNP
TGIILSFSDP AKAIGSSDIT RVIRLAPGDN DLYKLSVADN VAQAVASGRM SISQGHTTLR
RLDRELDRRS KMMRVFGFGL AAGGVAGLWK LPWLDVATAA MVGLLIGLLT QYTDHRAATR
EASEALAALL AGFVATLVAT LIGPINLNTV IIASVVVLLP GMSLTNAVNE LSSQHWVSGT
ARLAGALTVV FKLTVGALIA VSLCKLIGLK PQIYVAQPQP QWVEWVALLT TAYGFAVLFK
ARFRDYPWVM AAAMAGYVIA RYAGKLSGNA EEGVFLSAMV LTAAGNLFGR LMPKPGALIR
LPGIIMLVPG STSMRGFMDV VEHQSIHVGQ DELLGVTNVV MALVAGLLFG NLLIPTRKNL
|
|---|
| |