| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xfasm12_0455 |
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| Symbol | |
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| ID | 6119518 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xylella fastidiosa M12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010513 |
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| Strand | + |
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| Start bp | 501791 |
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| End bp | 503599 |
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| Gene Length | 1809 bp |
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| Protein Length | 602 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 641648525 |
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| Product | single-stranded DNA exonuclease |
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| Protein accession | YP_001775096 |
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| Protein GI | 170729663 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0608] Single-stranded DNA-specific exonuclease |
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| TIGRFAM ID | [TIGR00644] single-stranded-DNA-specific exonuclease RecJ |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCCCAAGA TTATTCGCCG TCTCTCTTTG CCGCTGGTTG TTTGGCCTGA CAATGTGCCG
CCATTGCTAC GACGTGTGTA CACGGCACGT GGTTGTGCTG ATCCGGTGAC GGCGCAACCC
TGTCTCGCTC AGTTGTTGTC ACCCGCCATG CTGAGCAACA TGCAGGCAGC CACTGTATTG
CTGACTGAGG TCATCAAGGC CAATGGGCGT ATTCTGGTTG TCGGTGATTT TGACTGCGAT
GGTGCAACTG CCTGTGCGGT TGCGGTGCGT GGTTTGCGTT TGCTTGGCGC GCGTAACGTG
ATGCATGCGG TCCCCAATCG TATGGTGCAT GGTTACGGTT TGTCGTCGGC ATTGGTTGAG
GAGTTGGCAC CGTTGCAGCC AGCGTTGCTT GTTACGGTGG ATCACGGCAT TGCTTGCCAT
GCTGGCATTG CTGCTGCTAA GGCCCGCGGT TGGAAGGTGT TGGTGACTGA TCACCATTTG
CCGGGTGAAA TCTTGCCGCC AGCCGATGTC ATTGTTAATC CGAATCTGCC TGGCGATTTG
TTTCCGAGTA AAACGCTGGC GGGTGTCGGG GTGATCTTTT ATGTACTGCT TGCGCTGCGT
GCGCGTCTTT ATCCTGCTGC TCGTGCTGCG TGCGAAGGTC AAGAAACGCG CATTCACAGT
TCTATTTCTC AGAAAAACCG TCCTGATTTG ACGTCCTTAC TGGATTTAGT TGCGGTCGGG
ACGGTTGCCG ACTTGGTGCC TTTAGATACG AATAATCGTG CTTTGGTTGC TGCGGGCTTG
CGCCGGTTGC GTCGTGGTCA AGGGTGTCTC GGACTACGCG CGTTGATCGA GGTCAGTGGC
CGTGATGAGT CGCAATTGAC CGCTACTGAT ATTGGTTTTG CATTGAGTCC GCGTCTGAAC
GCTGCGGGAC GGTTGGAGGA TATGGCGTTG GGCATTGAAT TGTTGCTCAC TGAGGATTGG
ACTCGCGCGC GTGCTATCGC AGCCATGCTT GAGGAGATTA ATGTCGTACG ACGTGTGGTA
CAGCAGGGTA TGAGTGACGA TGCTGAGCAG GCAGTAGCGC AAGCGATGGC GCAGTCAGGC
GGTGTGTTGC CAATGGCGGT GTGCCTGTTC GATCCGGACT GGCATCCAGG AGTGATTGGT
TTGGTCGCGT CCAAGATGAA GGACAAAATG CACCGTCCGG TGGTGGCTTT AGCCCCGGCT
GAGCCGGGAG GTACAGTGTT GCGAGGGTCG GCACGGTCGA TCCCAGGGCT GCATATCCGC
GATGTATTGG TGGCGCTCGA CAGTGGTTAT CCCGGGATGA TTCAGAAATT TGGAGGTCAT
GCGATGGCGG CCGGCTTGAC ACTGGATGCG GAGGTGTTGC CGGTGTTCGA ACGTGTATTT
CGTGCCCAAG TTGAGATGAT GGTTGATAAG AATGTGTTGC AGGCTGAGTT GTATAGCGAT
GGTGAATTGG CGGCCGATGA GCTGGACGCA TTACATGCGC GGGCATTGCG GCTGGGTGGG
CCATGGGGAC AGGGGTTTCC AGAGCCATTG TTTGATGGAG AGTTTGAAGT GCTGCAATGG
CGTGTCCTCA AGGAGCGTCA TTTGAAAATG GAGGTGCGTT ATTCAGGACG GTATGACGCC
CTGAACGCGA TTTATTTCAA CGGCTGGCAG GGTGATCCTC CAGCACGGCG ATTGCGTTTG
GCATATCGGT TGGTTTGCGA CGATTACCGC GGTGGTGATG CGATTCAGTT GATCGTGGAA
TATGCGGAAG TGATTGAATG TGATGTATCG GGTTCCCAAG CAATTTCCAG TGGCCTACTT
GATCCTTAG
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| Protein sequence | MPKIIRRLSL PLVVWPDNVP PLLRRVYTAR GCADPVTAQP CLAQLLSPAM LSNMQAATVL
LTEVIKANGR ILVVGDFDCD GATACAVAVR GLRLLGARNV MHAVPNRMVH GYGLSSALVE
ELAPLQPALL VTVDHGIACH AGIAAAKARG WKVLVTDHHL PGEILPPADV IVNPNLPGDL
FPSKTLAGVG VIFYVLLALR ARLYPAARAA CEGQETRIHS SISQKNRPDL TSLLDLVAVG
TVADLVPLDT NNRALVAAGL RRLRRGQGCL GLRALIEVSG RDESQLTATD IGFALSPRLN
AAGRLEDMAL GIELLLTEDW TRARAIAAML EEINVVRRVV QQGMSDDAEQ AVAQAMAQSG
GVLPMAVCLF DPDWHPGVIG LVASKMKDKM HRPVVALAPA EPGGTVLRGS ARSIPGLHIR
DVLVALDSGY PGMIQKFGGH AMAAGLTLDA EVLPVFERVF RAQVEMMVDK NVLQAELYSD
GELAADELDA LHARALRLGG PWGQGFPEPL FDGEFEVLQW RVLKERHLKM EVRYSGRYDA
LNAIYFNGWQ GDPPARRLRL AYRLVCDDYR GGDAIQLIVE YAEVIECDVS GSQAISSGLL
DP
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