| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xfasm12_0424 |
|---|
| Symbol | |
|---|
| ID | 6119487 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylella fastidiosa M12 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010513 |
|---|
| Strand | + |
|---|
| Start bp | 474170 |
|---|
| End bp | 475438 |
|---|
| Gene Length | 1269 bp |
|---|
| Protein Length | 422 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 641648497 |
|---|
| Product | phage-related DNA polymerase |
|---|
| Protein accession | YP_001775068 |
|---|
| Protein GI | 170729635 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGGCGATT GGGGGAACCT TCTGATCCCT TATCGATGTC GTTTTCCTAT TTCTCTCTAT
ACCGGGCGCT GGGCGGGGCG GCTGTTTCAG CCGCACAACC TGCCCCGCCC CACGCTCAGC
CAGCCAGTGA TCGCCGTTGG CATTGATGCC ATGAAAGCCG GTTGTGTGGA TGTGGTCTTT
GACGATGTCA TGGCGCTGAC CAGCAGCGCG CTGCGTAGTT GTCTGATTGC ACCAACCCAT
AAAAAGCTGG TCGTGGCCGA TCTGTCCAAC ATTGAAGGCC GCGTATTGGC GTGGCTGGCC
GGTGAAACCC CCAAGCTGCA CGCGTTTGGT GATTTTGATA CGTGCCAAGG GGTGGACGGT
ACATGGCACA GCGGCGAGGC CATCACTCAC GGTGCGCTGC GCGGCGCACC GATCACCCTG
CAACGTAATG CCGAGCACGA GCCTATCCGC CAAGGGGACG ACATTTACAA GCGCGCCTAC
GCTCATTCGT TCGGGATAGC GCCCCAGGCC GTGACCAAGG AGCAACGCCA GATTGGCAAA
GTGCAGGAAT TGGCCTTGGG GTATGGCGGC GGTGTCGGGG CCTTTGCCGC CTTTGCGGCG
ATGTATCACA TTGATTTGGA GGCGATGGCC GAGCAGGCCG CCTTACCACC CCTGCTGCTT
CAGGAGGCCG TGGAAGCGCT CCAGTGGACT AAGGCGAACC AACGTCCCAC CTTCGGCCTC
TCAGATCGCG CATGGTTGGC CTGCGATGTG TTTAAGCGCG CATGGCGCAA CGCGCATCCG
GCCATTGCGG CGTTTTGGCA GGCGTTGCAG TTCGCGGCCA CAGACGCCAT CGGCCACCCC
GAAACGGCGC ACACCTGCTG CGGTATCACA GTGCAGTACA GCCGTGCATG GCTGCGTCTG
CGTCTGCCGT CGGGGCGGGT GCTTTACTAC GCCGCTCCCA GAGTCGATGA GCACGGCGCG
CTGTCCTACA TGGGCACGCA TCCGATCACG CGCAAATGGA CGCGCATCAC CACCTACGGC
GGCAAGCTGG TCGAGAACAT CACCCAAGCT GTCAGCCGCG ACGTGTTGGC CGCCTGCATG
CCTGCGATTG AAGCCGCCGG TTACGCGATC GTTTTAACCG TGCACGACGA AATGATTACC
GAAGCCGATG ACAACGCCGC TTTCAATGCC GCGCACTTGG CCGCACTCAT GGCAACACCG
CCGCCCTGGG CGCAGGGGTT GCCCTTAGCG GCGGAAGGCT TCCAAACCCA CCGGTATAGG
AAGCAATGA
|
|---|
| Protein sequence | MGDWGNLLIP YRCRFPISLY TGRWAGRLFQ PHNLPRPTLS QPVIAVGIDA MKAGCVDVVF
DDVMALTSSA LRSCLIAPTH KKLVVADLSN IEGRVLAWLA GETPKLHAFG DFDTCQGVDG
TWHSGEAITH GALRGAPITL QRNAEHEPIR QGDDIYKRAY AHSFGIAPQA VTKEQRQIGK
VQELALGYGG GVGAFAAFAA MYHIDLEAMA EQAALPPLLL QEAVEALQWT KANQRPTFGL
SDRAWLACDV FKRAWRNAHP AIAAFWQALQ FAATDAIGHP ETAHTCCGIT VQYSRAWLRL
RLPSGRVLYY AAPRVDEHGA LSYMGTHPIT RKWTRITTYG GKLVENITQA VSRDVLAACM
PAIEAAGYAI VLTVHDEMIT EADDNAAFNA AHLAALMATP PPWAQGLPLA AEGFQTHRYR
KQ
|
|---|
| |