Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xfasm12_0246 |
Symbol | |
ID | 6119748 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylella fastidiosa M12 |
Kingdom | Bacteria |
Replicon accession | NC_010513 |
Strand | - |
Start bp | 287960 |
End bp | 289069 |
Gene Length | 1110 bp |
Protein Length | 369 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 641648327 |
Product | transport protein |
Protein accession | YP_001774903 |
Protein GI | 170729470 |
COG category | [R] General function prediction only |
COG ID | [COG0628] Predicted permease |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.33291 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACCGATC AGCCGACACA CAACAACTGC AACAACGATG CAATCAAGCG TCGACGCTCG CCACTGACGG CACGCCCCCA AGCTCCACTG TCACTCGTTG TATTAGCAAC ATTGGCAGTA GGTTACACAC TGTGGGCTAC ACAGGCAGTG ATCCTTCCCG TATTACTGGC TGTATTCTTC GCCCTAGTAG GCAACCCCAT CCTACGCGCA CTGGGTCATA TACGGATTCC ACGCGCCATT GGGGCGTTGC TGTTGTTGTG CTTGGGAATC AGCGGGACAG TGGTGCTAAG TGTAGAACTC GCGGGACCAG CCAGCGAATG GATACAACAA GCACCGGACA AAATACGCCA AGTAGCACGC CAAGTACGCC ACCTTACCAG ACCGATGCAA CAAGCCAATC AAGCAGTAGA AAGCTTGGCA CGCGCAGCCG ATGGCGAAAC CGAACGCCAG TCCCAGACTG TGCGCACCCG CCTATACAAC CCTTACACCT TACTGATGGA CACACACAAA CTGGTCATCT CGGTCTTGGG AGTGATCCTA TTGACGTTCT TCTTCATGGT TTTTGGGGAG AAGCTGCAAC GCAAAGCGAT TGCACTGCTC CCAAACCATC ATCAACAACG TTTCACCGCC TCAATCCTAC GCAACCTGGA ACACGAGATC TCACGCTATG TACTGACTAT CAGCGTGATA AACGCCCTCG TCGGCTTGAT ATTCAGCGTT TTACTGTTGC TACTAAGCAT TCCGCTACAA GAAGCACTGC TATGGGGCAC AGTGGTTGCC CTACTTAACT TCGCACCATA TGTAGGGCCG CTCATTGGTG TATTGCTGAT GCTACTCATC GGCTTAGTAC AATTTCATGA ATCCAGTAGA GCATTACTAC CGGCACTGCT GTATCTGATG CTACACACGC TGGAAGGGCA ACTCATCACA CCAATCATCC TCGGGCACCG CATGGCGATC TCGCCACTCA TGTTGATCGT GGCATTGCTA CTGTTCGGCT CCCTGTGGGG ACTCATTGGC CTCTTGCTGG CAGTACCAAT GCTTGTATGC ATCAAGATGG TGCTGAGCCG AATTGAGGAC TTGCAGCGCT GGTCACGACT GTTGGAATAG
|
Protein sequence | MTDQPTHNNC NNDAIKRRRS PLTARPQAPL SLVVLATLAV GYTLWATQAV ILPVLLAVFF ALVGNPILRA LGHIRIPRAI GALLLLCLGI SGTVVLSVEL AGPASEWIQQ APDKIRQVAR QVRHLTRPMQ QANQAVESLA RAADGETERQ SQTVRTRLYN PYTLLMDTHK LVISVLGVIL LTFFFMVFGE KLQRKAIALL PNHHQQRFTA SILRNLEHEI SRYVLTISVI NALVGLIFSV LLLLLSIPLQ EALLWGTVVA LLNFAPYVGP LIGVLLMLLI GLVQFHESSR ALLPALLYLM LHTLEGQLIT PIILGHRMAI SPLMLIVALL LFGSLWGLIG LLLAVPMLVC IKMVLSRIED LQRWSRLLE
|
| |