Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xfasm12_0141 |
Symbol | |
ID | 6121126 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylella fastidiosa M12 |
Kingdom | Bacteria |
Replicon accession | NC_010513 |
Strand | - |
Start bp | 166553 |
End bp | 167968 |
Gene Length | 1416 bp |
Protein Length | 471 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 641648224 |
Product | metallopeptidase |
Protein accession | YP_001774808 |
Protein GI | 170729375 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0739] Membrane proteins related to metalloendopeptidases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.000148736 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAAAATG CCGAACATAG GCACACTCAC AAACAACGTA TACGTGAACG ACTCCATGTC CTACACGTTT CCACCCTACA TCACAAGCTC AAGCATACGT TTCCTGCTGC GTTCAACCAA CGCTGGACAC CACGCCATTG GATCCACACG GCACTATTCG CCATGATAGG CGCATTAATT GCCACAATCA TCCCAGGCTT ATCTAACAAC AGCCCACCCA CCCAGCTATC AAGCCTAGCA ACATTAGCAC TCCCGCTCCC GCCACAATAC ACATCAACGG CGAACACATG GCGAATGGTG ACAATTAAAC CCGGGCAAAC CCTAAGCAGC ATATTCAACG AACTCAAGCT ATCCAGTAAC GACATGGAAC GAGTGCTGAA TTATGCCGAT CTACGTAAAG TACTCACCCG ACTCAGTCCA GGCGATGAAA TCTCCTTCGA TATACCGAAC GACGGTCAAT TACGCGGAAT GCGTTTTAAT CGTGACGAAA AACACCGCGT AGAACTGACT CTTGATGACA ACACCATCCA TCAACAGGTT AGCGAACGCC AGACCAGCAC CCGTACCGTC ATTGCTAGTG GCGAGATCAA GAGTTCGCTA TGGATCGCTG CACGCGAAGC AGGTTTATCA CCAGTAGATG TGATCACGCT GACCGATGAA ATTTTCAAAT ACGATATTGA CTTCGACAAA GATTTGCAGA CTGGCGACCG CTTCAGTGTG GTGATGGATG AAACTTGGCG AGAAGGTGAG CGCTTACCTG ACGCCAAGAT ATTGGCCGCC ACCTTTAACA CTGGAGGGAA AATCTATTCA GGCATACGCT TTATGCGCGA CGGCAAAGTC GAATACTTCG ATAAGGAAGG CAGACCGCTG AAGAAAAGCT TCATTCGTAT GCCAATTTCA TATGCACGGC TTAGCTCCAC CTTCGGCTTA CGCCGCCACC CTATTCTAGG CACAATGCGC ATGCATAAAG GTGTGGATTA TGCCGCCGCA ACCGGTACCC CAATTATGGC TGCGGGGAAT GCACGCGTAC AGTTTATCGG CCAACAGCGC GGATACGGCA ATGTAGTGAT CCTCAATCAC GGCAAAGGGT ACAGGACACT ATATGGACAC ATGTCGCGCT TTGGAAAAAT CAAAGCAGGC CAAAAGATTA ACCAAGGGAC GGTCATAGGC TACGTCGGCA TGACCGGCTT GGCCACTGGG CCACATCTAC ATTACGAATT TCAAGTGAAC GGCCAGCATC GCAACCCACT GTCAATCACG ATGCCACCAC CAGAACCTTT ACGCGGTAAA GATCTAATTG CATTCCGCAC TCAAACAGCC CCGCTAATCG CACAAATTCA ACAATACGAA AAACGATTCT ACGCAATAAC AAACAAACAC GACTCCAAAT CTACGGAGAA AAGTACACGT GGCTGA
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Protein sequence | MQNAEHRHTH KQRIRERLHV LHVSTLHHKL KHTFPAAFNQ RWTPRHWIHT ALFAMIGALI ATIIPGLSNN SPPTQLSSLA TLALPLPPQY TSTANTWRMV TIKPGQTLSS IFNELKLSSN DMERVLNYAD LRKVLTRLSP GDEISFDIPN DGQLRGMRFN RDEKHRVELT LDDNTIHQQV SERQTSTRTV IASGEIKSSL WIAAREAGLS PVDVITLTDE IFKYDIDFDK DLQTGDRFSV VMDETWREGE RLPDAKILAA TFNTGGKIYS GIRFMRDGKV EYFDKEGRPL KKSFIRMPIS YARLSSTFGL RRHPILGTMR MHKGVDYAAA TGTPIMAAGN ARVQFIGQQR GYGNVVILNH GKGYRTLYGH MSRFGKIKAG QKINQGTVIG YVGMTGLATG PHLHYEFQVN GQHRNPLSIT MPPPEPLRGK DLIAFRTQTA PLIAQIQQYE KRFYAITNKH DSKSTEKSTR G
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