| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_6422 |
|---|
| Symbol | |
|---|
| ID | 6125345 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia MC0-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010512 |
|---|
| Strand | - |
|---|
| Start bp | 458830 |
|---|
| End bp | 459753 |
|---|
| Gene Length | 924 bp |
|---|
| Protein Length | 307 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 641647435 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_001774032 |
|---|
| Protein GI | 170734918 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTCGACA ACGTCACCAT CAATCAACTT CGGGCATTCG TCGCCGTGTG TGACCAGGGA
AGCTTTTCCG GAGCGGCAAG GGAACTGAGG CGCGCGCAGT CGGCGATCAG TCATGCGATC
AGCGCGCTCG AAAGCGCCTT CGACGTGATG CTGTTCGAGC GCAACACGCG CAAGGCGACG
CTCACCGCCG CCGGCCGCAG CCTGCTGCCC GATGCGCGCG GGGTGATCTC ACGCACCGAG
GAAATGAAGA TTCGTGCGGT TGCGATCGCC GAAACCGGCG TCCCGCAGGT GTCGATTGCC
GTGGACACCT ATTTTTCGCG CACGCACCTG ATCGAATGCT TGCGCACGCT GCAGGCGGAA
TTTCCAACGG TTGCGATCAA TCTGCGCATG ACGACCATGC AGGGCGGCGA GCGTCTGGTG
CTCCAGGGCA CGTGCGCATT GGCGGTGACG ATCACGGACG TGCCCGAGCT GAGCCCGGGC
ACCATCGAAC GGCATCATTT ATTCGATGCG CAAATGGTGA CCGTATGTGG GCCGGCGCAT
CCGCTGGCCG CCATGGCGAA GCCGATCCCG CGGGAGGAAT TCGGCCGGCA CATCCAGCTC
GTCGTCACCG ACAATCAGCC CGATGCGGAA AAGACTCAGC AAGGAGTCGC CAGCGAACGC
CAGTGGTGGG TGAACGATCT CGGCGCGAAG CACGACCTGC TCAGGGGGAG CCTGTGCTGG
GGGCACATGC CGCGCCATAT GGTCGACGCG GACCTCGCGA AGGGCACGCT CGTCGAGCTC
CAGCGGCGCG CGTGGCACAT GCGGCCCCTC ACGTTCATGG TCTCGCAGCG GCGCGGATAC
GCGTTTTCCG GATGCGAGAC GCGGCTGGTC GAACTCCTTG GCCAGTGTCC TTCGCGAAGG
GTGCGAAGAG GGAAGTCGAC GTAA
|
|---|
| Protein sequence | MLDNVTINQL RAFVAVCDQG SFSGAARELR RAQSAISHAI SALESAFDVM LFERNTRKAT
LTAAGRSLLP DARGVISRTE EMKIRAVAIA ETGVPQVSIA VDTYFSRTHL IECLRTLQAE
FPTVAINLRM TTMQGGERLV LQGTCALAVT ITDVPELSPG TIERHHLFDA QMVTVCGPAH
PLAAMAKPIP REEFGRHIQL VVTDNQPDAE KTQQGVASER QWWVNDLGAK HDLLRGSLCW
GHMPRHMVDA DLAKGTLVEL QRRAWHMRPL TFMVSQRRGY AFSGCETRLV ELLGQCPSRR
VRRGKST
|
|---|
| |