Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_6242 |
Symbol | |
ID | 6124990 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010512 |
Strand | + |
Start bp | 242880 |
End bp | 243773 |
Gene Length | 894 bp |
Protein Length | 297 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641647259 |
Product | inner-membrane translocator |
Protein accession | YP_001773856 |
Protein GI | 170734742 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.426254 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCTGTCAT TCATTGTCGA CGTATTGATC CGCACCGCCG ATCTGCTGCT GGTGTCGGTC GGCCTGTCGA CGCTCTATTC GCTGATCCGC TTTCCCAACA TCGCGCATGT CCAGTACGCG ATGCTCGGCG CATTCGCGAC GCTCTGGCTG GAGCGCGCGG GGATGCCGTT CGCACTCGCG ACGGTCGTGT CCTGCGTGCT GATCGGCACG GCCGCGACGC TGCTGAACCT GTTCGTGTTC GCGAGACTGC TGCGCTCCGG CAGCGCGGTG GCGATGATCG GCTCGCTCGC GATCTCGATG CTCGCGGTCG CGCTGGTGCT CGGCGTCGCC GGCTCGCGGC CGCAGCAGTA TGCGCAGGAC GTGCATCCGC CGATGGTGAT CGCCGGCGTC GCGCTGTCCG TGCCGCAGTT GGGCTCGATC GCATGCGGCG CCGGCGCGCT CGCGATATTC GCGGCACTGC TGTACCGCAC CGGCCTCGGC CGGGCGATGC GTGCGCTCGC CTCGAATCGC GCCCTGGCGC TCGCGACCGG CATCGACGCG ACCCGCGTGA CCAACGTGAT CACGTTCGCG AGCGGCGTGC TGGCGGCGCT CGGCGGCACG ATGCTCGGCG CCACCGAGAG CGTGCACGTG AATCTCGGCT ACGGGCTGCT GATCCCGGTG TTTTCCGCGG CGATCCTGGG CGGCCTCGGT AATCCGCTCG GTGCGGCAGC CGGTGCGCTG CTGATCGCGG TGGCCGAAAC CGTCGCGTTG AACGTCGATT TCGGCGGGCT CGTCGACCGG CCGATGCAGT TCTTTCCGGT CGAGTACGTC GGCGCGGTGT CGTTCGCGAT CCTGCTCGTC GCCCTGATCT TCCGGCCCTA CGGCATCTTC GATCGGGAGG TACGACGTGT CTAG
|
Protein sequence | MLSFIVDVLI RTADLLLVSV GLSTLYSLIR FPNIAHVQYA MLGAFATLWL ERAGMPFALA TVVSCVLIGT AATLLNLFVF ARLLRSGSAV AMIGSLAISM LAVALVLGVA GSRPQQYAQD VHPPMVIAGV ALSVPQLGSI ACGAGALAIF AALLYRTGLG RAMRALASNR ALALATGIDA TRVTNVITFA SGVLAALGGT MLGATESVHV NLGYGLLIPV FSAAILGGLG NPLGAAAGAL LIAVAETVAL NVDFGGLVDR PMQFFPVEYV GAVSFAILLV ALIFRPYGIF DREVRRV
|
| |