Gene M446_6620 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_6620 
Symbol 
ID6130883 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp7285573 
End bp7287336 
Gene Length1764 bp 
Protein Length587 aa 
Translation table11 
GC content70% 
IMG OID641646709 
ProductABC transporter related 
Protein accessionYP_001773308 
Protein GI170744653 
COG category[V] Defense mechanisms 
COG ID[COG1132] ABC-type multidrug transport system, ATPase and permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00971242 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.26749 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATGACC TCTGCGCCTA CGCTGAACGG CCCTGGGCCT TCGTGGCCCG CTACCTTCGC 
CGCCGCGTGG TTCCCCACGC GGCCATCGTC GTGTCGGTGC TCGCCGCCGT CGCCTGCTCG
GTGAGCACGC AGTACGGGCT CAAGGGCGTG GTCGATGCGC TCGGCAAGGG GCCGCAATCG
GGCGAGATCT GGGGGGCGCT CGCCGTCCTG ATCGCCTTCA TCGGCGCCGA CAACATGCTC
TGGCGGGTGG CGAGCCTGAT CGCGAGCTTC ACCTTCGTGG CGGTGACCGG CGACATCCGC
CGCGACCTGT TCCGGCACCT GACCGGCCAC TCGCCCTCCT ACTTCGCCGA CCGGCAGCCC
GGCACGCTGG CGAGCCGCAT CACGGCGACC TCGAACGCGA TCTTCACCGC CGAGAACATG
TTCGTCTGGA ACGTGATGCC GCCCTGCGCG GCCGCCTTCG GGGCGATCCT GTACGTGGGC
GCGGTCTCGC TGCCGATGGC GGCGGGGCTC CTGGTGATCT GCGGCGGCGT CGTGGTGCTG
ATGTTCCGCA TCGCCGCCGC CGGCAAGCCG CTCCACCACG AATTCGCCGA GAAGGCGGCC
GCCGTCGACG GCGAGATGGT CGACCTCGTC AGCAACATGC CGCTGGTGCG CGCCTTCTCG
GCCTTCAAGC GGGAATTCGT GCGCTTCGAC GGCACGATCG GCACCGAGAT GCGGGCGCGC
CGCCGCAGCC TGCTCTACCT GGAGAAGCTG CGCATCATGC ACGCGGTCAT CACCGTGGTG
GCGGTGCTCG GCCTTCTCTA CTGGGCGGTG CGGATGTGGG AGGTGGGTTC GGCGACCGCC
GGTCAGGTGG TGCTGGTCTG CACCCTCGGC ATCACGATCC TGGCCGCGAC CCGCGACCTC
GCGGTCGCCC TGGTCGACGT CACGCAGCAC ACCGCGAGGC TCTCGGAGGC GCTCACCACC
CTGCTGCAGC CCCACGACCT GCGCGACCAC CCGGAGGCGA AGCCCCTCGT CGGCGAGGGC
GCGCGGCTGG ATTTCGAGCA CGTCGGCTTC AGCTACCCGG ACGGGCGCGA GGTCTTCAGC
GACTTCAACC TCACGATCGA GCCCGGGCAG AAGGTCGGCC TGGTCGGGCG CTCGGGGGGC
GGCAAATCGA CGCTTTTCAC CCTGCTGCAG CGCTTCTACG ACCCGCAGAG CGGGCGCATC
CTGATCGACG GCCAGAATAT CGGCCGCGTC ACGCAGGAGA GCCTGCGCGA GGCGATCACC
GTGGTGCCGC AGGACATCTC GCTGTTCCAC CGCTCCTTGC GCGAGAACAT CCGCTACGGC
CGGCCGGATG CGACGGACGA GGAGGTCTGG GCGGCGGCCG AGGCCGCGCG CTGCACGGAT
TTCATCAGTG ACCTGCCGCA GGGCTTCGAC ACGATCGTGG GCGACCGCGG CGTGAAGCTC
TCGGGCGGCC AGCGCCAGCG CATCGCGGTG GCCCGCGCCA TCCTCAAGGA CTCGCCGATC
CTCCTCCTCG ACGAGGCGAC CTCCGCCCTC GACACCGAGT CGGAGGAGGC GATCCGCGAG
GCGCTGCACA ACCTGATGCA GGGCCGCACG GTGATCGCCA TCGCGCACCG CCTGTCGACC
CTGAAGGATT TCGACCGGAT CGTGGTGCTC GACGGGGGCC AGGTGATCCA GGACGGCTCG
CCCGAGCGGC TGATCCATCT CGACGGCTTC TACCGCGACC TGATCCAGCG CGAGACGCTC
AAGCTGTCGC GCGAGGCGGC CTGA
 
Protein sequence
MDDLCAYAER PWAFVARYLR RRVVPHAAIV VSVLAAVACS VSTQYGLKGV VDALGKGPQS 
GEIWGALAVL IAFIGADNML WRVASLIASF TFVAVTGDIR RDLFRHLTGH SPSYFADRQP
GTLASRITAT SNAIFTAENM FVWNVMPPCA AAFGAILYVG AVSLPMAAGL LVICGGVVVL
MFRIAAAGKP LHHEFAEKAA AVDGEMVDLV SNMPLVRAFS AFKREFVRFD GTIGTEMRAR
RRSLLYLEKL RIMHAVITVV AVLGLLYWAV RMWEVGSATA GQVVLVCTLG ITILAATRDL
AVALVDVTQH TARLSEALTT LLQPHDLRDH PEAKPLVGEG ARLDFEHVGF SYPDGREVFS
DFNLTIEPGQ KVGLVGRSGG GKSTLFTLLQ RFYDPQSGRI LIDGQNIGRV TQESLREAIT
VVPQDISLFH RSLRENIRYG RPDATDEEVW AAAEAARCTD FISDLPQGFD TIVGDRGVKL
SGGQRQRIAV ARAILKDSPI LLLDEATSAL DTESEEAIRE ALHNLMQGRT VIAIAHRLST
LKDFDRIVVL DGGQVIQDGS PERLIHLDGF YRDLIQRETL KLSREAA