Gene M446_6619 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_6619 
Symbol 
ID6130882 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp7283934 
End bp7285274 
Gene Length1341 bp 
Protein Length446 aa 
Translation table11 
GC content75% 
IMG OID641646708 
Productmajor facilitator transporter 
Protein accessionYP_001773307 
Protein GI170744652 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0215095 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.396718 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGCGG CGCGACGATC CCAGCGCCGG GCCGCCGGCC ACCGGGAGGT GCCCCGCTAC 
GAGCCGCGGC CGGAGGCGGG CCGCGAGCCG GCGCGCGCGC CCTCGCCCGC GCCGCTCCCG
GCCACGCGGC GGGAGAAGCA CGCCCCCTCG GCGGCGAGCG CGCGCGGGCT CGACGCCTTC
ACGTTCTTCG TGGCCAACCT CCAGACCGGC TTCGGACCCT TCGTGGCCGT GCACTTCACG
GCCCACCAGT GGACGCAGGC CGATATCGGC CTCGTCCTCA CCATCGGCGG CCTGTTCAGC
CTGCTCGGGC AGGTGCCCGG CGGCGGCTTC GTCGATTGGG TGCGCTCGAA GCGCGCCGTG
GCGGCCCTCG CGGTGGGGGT GATCGGGGCG AGCGCGGCGG GCCTCGGCCT CTACCCGACC
TTCCTTGTCG CGGCCCTCGC CATGGCGGCC CATTCGCTCG CCAGCTGCGT GCTCACGCCC
GCCATCGCGG CGATCAGCCT CGGCCTCTCC GGCCATGCCC GGCTCGGCGA GCGCCTCGGC
CGCAACGCCC GCTTCTCCTC GATCGGCAAC GCCCTGGCGG CGGCCGGCAT GGGGGCCTGC
GGCTACTACC TGTCGAACGC CGCCGTGTTC TACGTGACCG CGGCCCTGGT CGTGCCGACG
CTGGTGGCGC TCTCCACGAT CCGCGCGGGC GAGATCGAGG TGGTGCGGCC GCAGGGGCGC
GACGGTGCCC CGCCCCCGAG CGGATGGGCG GGCCTGCGGC TCCTCCTCAC CAACCGGGCC
CTGCTCTGCT TCGGCGCCTG CATCCTGCTG TTCTACGTCG CCAACGCGGC GATGCTGCCC
CTGGTCGGCA GCGTGCTGAC CATGCGGGCG AGCCAGACCG CCACCATCCT GATCGCCGCC
TGCATCATGG CGCCCCAGAT CGTCCTCGCG CTGATCGCCC CGGCGGTCGG CCGGGCGGCC
CAGACCTACG GGCGGCGCCC GCTCCTCGTC CTGGGCTTCG CCGCCCTGCC CCTGCGCGGG
ATCCTGTTCG CCTACGCGCA GGAACCCGAG GTGCTGGTGC TGATCCAGGT GCTCGACGGC
GTCTCGGCGG CGGTGATCGG CGTGATGGTC CCGCTCGTGG TCGCGGACGT GACCCGCGGC
ACCGGGCGCT TCAACCTCGC CCTCGGGGCG GTCGGCACCG GCATGGGGAT CGGCGCGGCG
CTCAGCACGA CCCTGTCGGG TGCGATGGCG GACCATCTCG GCACCCATGC GGCCTTCCTG
GGGCTCGCCG GCGTGGCCGT CCTGGCCCTG CTGCTGCTGC TCCTCGTGAT GCCGGAGACC
CGGCGCGGGC GCGGGGCCTG A
 
Protein sequence
MTAARRSQRR AAGHREVPRY EPRPEAGREP ARAPSPAPLP ATRREKHAPS AASARGLDAF 
TFFVANLQTG FGPFVAVHFT AHQWTQADIG LVLTIGGLFS LLGQVPGGGF VDWVRSKRAV
AALAVGVIGA SAAGLGLYPT FLVAALAMAA HSLASCVLTP AIAAISLGLS GHARLGERLG
RNARFSSIGN ALAAAGMGAC GYYLSNAAVF YVTAALVVPT LVALSTIRAG EIEVVRPQGR
DGAPPPSGWA GLRLLLTNRA LLCFGACILL FYVANAAMLP LVGSVLTMRA SQTATILIAA
CIMAPQIVLA LIAPAVGRAA QTYGRRPLLV LGFAALPLRG ILFAYAQEPE VLVLIQVLDG
VSAAVIGVMV PLVVADVTRG TGRFNLALGA VGTGMGIGAA LSTTLSGAMA DHLGTHAAFL
GLAGVAVLAL LLLLLVMPET RRGRGA