Gene M446_6539 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_6539 
Symbol 
ID6133792 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp7190390 
End bp7191475 
Gene Length1086 bp 
Protein Length361 aa 
Translation table11 
GC content72% 
IMG OID641646627 
Product2'-deoxycytidine 5'-triphosphate deaminase 
Protein accessionYP_001773230 
Protein GI170744575 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0717] Deoxycytidine deaminase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.62826 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGGCGT TGCGCGACGG AATACAGGCG GCGGAGAGCA TCGTGGGCCT GCGCGCGGCC 
GGGGTGATCC GCACCGAGGC GCCCTTCGCG GACGACCAGG TCCAGCCCGC GAGCCTCGAC
CTGCGCCTGG GGCGGAAGGC CTACCGGGTC CGCGCCAGCT TCCTGCCCGG CCGCACCCGG
GACGTCGCCG CCTGCCTCGC CAAGCTCAAG CTGCACGAGA TCGACCTGCG CCAGGGCGCC
GTGCTGGAGA CGGGCTGCGT CTACATCGCC GAATTGCAGG AGGGCCTCGC CCTGCCGCCC
GACCTCGCGG CGAGCGCCAA TCCCAAGAGC TCCACCGGCC GCATCGACGT CTTCACCCGG
GTGATCACCG ACCAGGCGCG CGAGTTCGAC ATGGTCGAGC CCGGCTATGC CGGGCCGCTC
TTCGCCGAGA TCTCGCCGCG CACCTTCCCG GTCCTGGTGC GCACCGGCTC GCGCCTGTCC
CAGATCCGCT TCCGGAAGGG GTCCGTGCGC CTCGGCGACG AGGCGCTGGC GCGGCTGCAC
GCGCAGAGCC CGCTCGTCAG CGCGCCCGAT CCCTCCTTCC AGGGCGGGGT GGCGGTGTCG
GTGGACCTCG CGGGCTTCGA CGGGCTGATC GGCTACAGGG CCAAGCGCCA TACCGGCCTC
GTCGACGTCG ACCGGCCGCG CGCCTACCCG GTCGGGGAGT TCTGGGAGCC CCTGCGGGCG
GACGGCTCGG GCACGCTGAT CCTCGATCCC GGCCAGTTCT ACATCCTGGC CTCGAAGGAA
TGCGTGCAAG TGCCGCCGGA CTTCGCCGCC GAGATGGTGC CCTTCGACCC CCTGGTGGGC
GAGTTCCGCG TCCACTACGC GGGCTTCTTC GATCCGGGCT TCGGCCATGC CGAGGCGGGC
GGGGCGGGGG CGCGGGCGGT GCTGGAAGTG CGCTCCCGCG ACGTGCCCTT CATGCTGGAG
GACGGCCAGA TCGTCGGGCG GCTGGTCTAC GAGCGCATGG CCGAGCGGCC GGCCGCCCTC
TACGGCGAGC AGGCCGGCTC GAACTACCAG GCCCAGGGCC TCAAACTCTC GAAGCACTTC
GTGTAG
 
Protein sequence
MVALRDGIQA AESIVGLRAA GVIRTEAPFA DDQVQPASLD LRLGRKAYRV RASFLPGRTR 
DVAACLAKLK LHEIDLRQGA VLETGCVYIA ELQEGLALPP DLAASANPKS STGRIDVFTR
VITDQAREFD MVEPGYAGPL FAEISPRTFP VLVRTGSRLS QIRFRKGSVR LGDEALARLH
AQSPLVSAPD PSFQGGVAVS VDLAGFDGLI GYRAKRHTGL VDVDRPRAYP VGEFWEPLRA
DGSGTLILDP GQFYILASKE CVQVPPDFAA EMVPFDPLVG EFRVHYAGFF DPGFGHAEAG
GAGARAVLEV RSRDVPFMLE DGQIVGRLVY ERMAERPAAL YGEQAGSNYQ AQGLKLSKHF
V