Gene M446_6458 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_6458 
Symbol 
ID6129708 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp7104813 
End bp7106144 
Gene Length1332 bp 
Protein Length443 aa 
Translation table11 
GC content76% 
IMG OID641646548 
Producthypothetical protein 
Protein accessionYP_001773151 
Protein GI170744496 
COG category[V] Defense mechanisms 
COG ID[COG0577] ABC-type antimicrobial peptide transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.450145 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCCGCT TCGTGCTCGC CGATCTGCGA CGGCTCTGGG CCGCCTCCCT GGTCATCGTG 
CTCCTGGTGG CCCTGTCCAC CGCGCTCGGC GTGGCGGTCA CGCTGCAGGA GCGCGCGCTG
CGGCTCGGCA GCGCGCGCGC CGCCGACCGG TTCGACCTCG TGGTCGGGGC GCCCGGGAGC
GAGGTGCAGC TCGTCCTGTC GGCCGTCTTC CTCCAGCCCG CGCCGCTGCC GCTCGTCCCC
GGCGACGTGC TCGCCCGGCT CTCGGGCGAT CCCCGCGTCG CCTGGGCGGC GCCGGTCGGC
TTCGGCGACA GCTATCGCGG CCACCCGATC GTCGGCACGA CGACGCGCCT CGTCGAGGGC
GTCGCGGGCG GGATCCGGGA CGGGCGCCCG TTCCGGGCCG AGGGCGAGGC GGTGGCCGGA
TCCGCGGTCG ACCTGCCGCT CGGCACCGCC CTGCATCCGA TGCACGGCAG CGGCGGCGAG
CCGGGCCCCA CCCATGCGGG CGCCACCTAC CGCCTCGTCG GCCGGCTGTC CCCGACCGGC
ACGGCGTGGG ATCGCGCCAT CCTGGTCCCG ATCCAGGCGG TCTGGCACGT CCACGGGCTC
GGCCAAGACC ACGGCCAAGA CCACGGCCAA AATCACGGCC AAGACCACGG CCAGGAACAC
GGCCAAGCCT ACGGCCAGGA ACACGGCCAG GAACACGGTC TTGGTCAGGA GCGCGGGCGC
GCCGGGCCGG ACGGGGAGGC GGCCCACGGC CGCATCAACG CGCAGGCGCC GCTGGACGAG
ACCTTCGACC ACGATCTGCC GGGCCTGCCG GCCATCCTGG TCAAGCCCAC CTCCTTCGCG
GCGGCCTACA AGCTGCGGCA GGAGTACCGC GGCGGCGGCA CGCTGGCGGT GTTCCCGGCC
GAGGTGCTGA CCCGCCTCTA CGCGACCCTC GGCGATGCCC GGCAGGTGCT GATGGCCATC
TCCGCCGGCG CCGAGGCCCT GGTGGCGGCC GCGCTCCTCC TGATCACGGT GATCCACGTG
GCGCAGCGGC GGCGCCAGAT CGGTGCGCTG CGGGCCTTCG GCGCGCCGCG CCGCGCGGTC
TTCCTGATCG TCTGGGGCGA GGCGATGCTG CTCGTGTCGG CGGGGATCGC CGGCGGCGTC
GCCCTCGGCT ACGGGGCCGC CCGGCTCCTC GCGCGCCTCG CGCAGGGGCA GGGCGGCTTC
ACCCTGCCGG TGGAACTGGC CGCCGAGGAC GCCGCCTTCG CGGGGGCGCT CCTCGCGGTC
GCCTCCGTGC TGGCCCTGCT CCCGGCCTGG CTCGCCTACC GGCAATCGCC CGCCGCGTCC
CTGCGCGCCT GA
 
Protein sequence
MIRFVLADLR RLWAASLVIV LLVALSTALG VAVTLQERAL RLGSARAADR FDLVVGAPGS 
EVQLVLSAVF LQPAPLPLVP GDVLARLSGD PRVAWAAPVG FGDSYRGHPI VGTTTRLVEG
VAGGIRDGRP FRAEGEAVAG SAVDLPLGTA LHPMHGSGGE PGPTHAGATY RLVGRLSPTG
TAWDRAILVP IQAVWHVHGL GQDHGQDHGQ NHGQDHGQEH GQAYGQEHGQ EHGLGQERGR
AGPDGEAAHG RINAQAPLDE TFDHDLPGLP AILVKPTSFA AAYKLRQEYR GGGTLAVFPA
EVLTRLYATL GDARQVLMAI SAGAEALVAA ALLLITVIHV AQRRRQIGAL RAFGAPRRAV
FLIVWGEAML LVSAGIAGGV ALGYGAARLL ARLAQGQGGF TLPVELAAED AAFAGALLAV
ASVLALLPAW LAYRQSPAAS LRA