Gene M446_6457 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_6457 
Symbol 
ID6129707 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp7104037 
End bp7104816 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content78% 
IMG OID641646547 
ProductABC transporter related 
Protein accessionYP_001773150 
Protein GI170744495 
COG category[V] Defense mechanisms 
COG ID[COG1136] ABC-type antimicrobial peptide transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.394794 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCGCCC TGCGGATCAG CGACCTGTCG GTCTCCTTCC CGGGTCTCGC CGCGCCGGCC 
CTGGCGATCG AGCGCCTCGG CCTCGCGGCC GGCGCGCGCG TCGCCGTCAC GGGGGCTTCG
GGCTCGGGCA AGAGCACCTT CGTCAACCTG ATCACGGGCC TCGCCCGGCC GGATCGCGGC
CAGATCCAGT GGGGCGAGAC CGACATCGCC GCCCTGCCGG AGGCGCGCCG CGACCGCTGG
CGGGCCGAGA CGGTCGGGCT CGTCATGCAG GATTTCCACC TGTTCCCGGG GCTCTCGGCC
CTCGACAACG TGCTCCTGCC GGCCCGGCTC TCCGGTGCGG GGAATGCGGC GACGAGGGCG
CGCGCCGCCG ATCTCCTCGA CCGGGTCGGC CTCGCCCGCC CCGGGCAGGA CGTCGCCACC
CTGTCGCGCG GGGAGATGCA GCGCGTGGCA GTGGCGCGGG CCCTGCTGCG CCGGCCGGGC
CTCCTCGTCG CCGACGAGCC GACCGCGAGC CTCGACCCGG AGGCGGGTGC GGCGGTGGGC
GCCCTGCTCC TCGACCTCGC GCGGAGCGAG GGGGCGACCC TGATCGTGGT GAGCCACGAC
GAGCGGCTGA CGGAGCGGCT CGACCGCCGC ATCCGCCTCG CGGCCGGCCG GATCGCCGCC
GACACGGGGG CCGAGCCGGG CGCCGCGGGA GCAGCCGAAC CCGGTGCGGC CGAAGCGGGC
GGGCCCGGCA CGGCCGCCGC GGGCGGGCCC GGCACGGCCG CCGCGGGAGC GATGCCGTGA
 
Protein sequence
MLALRISDLS VSFPGLAAPA LAIERLGLAA GARVAVTGAS GSGKSTFVNL ITGLARPDRG 
QIQWGETDIA ALPEARRDRW RAETVGLVMQ DFHLFPGLSA LDNVLLPARL SGAGNAATRA
RAADLLDRVG LARPGQDVAT LSRGEMQRVA VARALLRRPG LLVADEPTAS LDPEAGAAVG
ALLLDLARSE GATLIVVSHD ERLTERLDRR IRLAAGRIAA DTGAEPGAAG AAEPGAAEAG
GPGTAAAGGP GTAAAGAMP