| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | M446_6399 |
|---|
| Symbol | |
|---|
| ID | 6132479 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium sp. 4-46 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010511 |
|---|
| Strand | + |
|---|
| Start bp | 7031164 |
|---|
| End bp | 7032693 |
|---|
| Gene Length | 1530 bp |
|---|
| Protein Length | 509 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 641646494 |
|---|
| Product | integrase family protein |
|---|
| Protein accession | YP_001773097 |
|---|
| Protein GI | 170744442 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.346311 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGAGTTCG ACCGGGAGCT ACACACGGCA CGCCGCCGTC TGTCTGGGGC TCAGGACGAC
ATCTCTCTAG CTGAAGCGGA GCGTCTGGCC GCGGCTTGGC TGTCGAAGCT GCTCAGTGAT
GACGAGAGAA AGCGCGAAGC CGGCCTGACG GAGGTGGCTT ACCAGCGCGC ACTCAAGGCC
GCAGAGTACG TGGGTCCTGC TGCTGCAGCC GAGCTTGCAA GGGGCAGTAT GGAAACAATC
TGGATGGAGG TGGAGGGGGT CCTTCGCGAG AACGGCTTGT CATCGCGGGA AGGCTCGGAG
TCCTGGCGGA GGCTGGGGTT CGCGATGCTG AAGGCTCAAA AGCGTTGGGC TGACGCCCTG
CTTGCCCGGA ACAAGGGGGA GGTGGTCGAA ACACCAGTAC CGCCCAAGGC AGCCTCTACG
CCCCGTTCCT GCACCGTTGA AGACCTCATT ACGGCGTACC TAAACGATCC CACGAGGAAG
CGCACTCCTG GCACGCTCAA GACCTACCAG ACGGTCTTCC GGGCAATGAG GGAGTTGCTT
GGACCTGACA CCCCGGTGGA CAGCATCCAT CGCGTGGACT GCGAGCGCAT CCGCAGTGTC
ATCATAAGGC TCCCGAAGAA CGCTTCTCAG CGGTTCCCTG ACCTATCCCT TGAGGATGCA
GCTAAGCTGG CTGATGCCGA GAAGCTTGAG CGGCTTGGGG TGTCTGCGGT CAACAACTAC
CTCCACAACC TATCGGCCCT GTTCAAGTGG GGCGTGAACA CATGGCGTGT GACCCGGAAC
CCAGCTCAGG GGCTCGCGCT TCCTGATGAC CGCGACGAAC GCGACCTTCG CCAACCCTTC
AGCATCGCGC AGCTTCAGGC AATATTCACG GCCCCGCTCT ACACGGGATG TCAGGATGAT
GAGGAAGGCT ACGCGAAGCC TGGACCGAAC GTGCCGCGTC GCGGGCGCTT CTGGGTCCCC
CTGCTCTCCC TCTGGACGGG CATGAGGCTG GGTGAATGCT GTCAGCTACG AGTTGAGGAT
GTGGCTGAGT ACGAAGGGGT GCCCGTCATC CTCATCAACG ACGACGAGGA GCCAGGGGGC
GACGAGGCTG ACAAGAAGCG TGTGAAGACG GAGGCAGGCA GGCGGTTCGT CCCGGTTCAC
CCTGAACTTC AGCGTATCGG CTTTCTCAAG TTCGTAGAGG CCATGCGGGG CAGGGGGGAG
AAGCGCCTGT TCCCAGAGAT CAAACCCGAC TCGATGGGGT ATCTGTCCGG CACCTTCTCG
AAGTGGTTCA ACGACAAGCG CCGCTTCCTG GGCAAGCTCG ACATGTCCGG GACGGGGGTG
TCATTCCACA GTTTCAGGCA CAACTACCGT GATGCTCTCC GAGAGGCTGA GATCAGCCTT
GAGCGGGTGA GGGCTCTTGG TGGATGGAGA CGAGACAGCG AAGGTGAGGA GGCCATCTAT
GGTAAGGGAT TGAAGGCAGC GACTCTCTAT AAAGAGATTG AGAAGGTTCG CTATTCAGGG
CTTGCGCTCA CCCACCTTCA TACCGGGTGA
|
|---|
| Protein sequence | MEFDRELHTA RRRLSGAQDD ISLAEAERLA AAWLSKLLSD DERKREAGLT EVAYQRALKA
AEYVGPAAAA ELARGSMETI WMEVEGVLRE NGLSSREGSE SWRRLGFAML KAQKRWADAL
LARNKGEVVE TPVPPKAAST PRSCTVEDLI TAYLNDPTRK RTPGTLKTYQ TVFRAMRELL
GPDTPVDSIH RVDCERIRSV IIRLPKNASQ RFPDLSLEDA AKLADAEKLE RLGVSAVNNY
LHNLSALFKW GVNTWRVTRN PAQGLALPDD RDERDLRQPF SIAQLQAIFT APLYTGCQDD
EEGYAKPGPN VPRRGRFWVP LLSLWTGMRL GECCQLRVED VAEYEGVPVI LINDDEEPGG
DEADKKRVKT EAGRRFVPVH PELQRIGFLK FVEAMRGRGE KRLFPEIKPD SMGYLSGTFS
KWFNDKRRFL GKLDMSGTGV SFHSFRHNYR DALREAEISL ERVRALGGWR RDSEGEEAIY
GKGLKAATLY KEIEKVRYSG LALTHLHTG
|
|---|
| |