Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | M446_6376 |
Symbol | |
ID | 6133421 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium sp. 4-46 |
Kingdom | Bacteria |
Replicon accession | NC_010511 |
Strand | + |
Start bp | 7003502 |
End bp | 7004836 |
Gene Length | 1335 bp |
Protein Length | 444 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 641646470 |
Product | patatin |
Protein accession | YP_001773074 |
Protein GI | 170744419 |
COG category | [R] General function prediction only |
COG ID | [COG1752] Predicted esterase of the alpha-beta hydrolase superfamily |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.103764 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGGATC GGCCCGTGCC CGAGATTCCG GCCTTCGTCG CGTTCGCCGG GGGCGGCGCG AAGGGATTGG TCCACGTAGG GGCCCTGAAG GCCCTCGAAA CCAGGGCCGT GGACATCCGC GGAGTCGCCG GGACCTCCGC CGGCGCCATC GTGGCGGCGC TGAAGGCCAG CGGCTTCTCG GCCGACGACA TGGCCGACCC GATCACCGGA CGCACCATCC TCGACGAACT GGCCCGCATC GATGCGGCCC TGTCCACGGC GCCGGCGCTG TTCGGGGAAG GCGGATGGGC GCGCGTGGCG CGCCTGCGCG CGTTGCTCCG CTGCGGCCTC GCGCGGGTCG CGGTCGCGGC GGCCCTCTCG GTCACCCTCC TCCTCCTCGG CTCGTTCCTG TGCGCCGCGA TGGCGAACGT CGCCGCGGCG CTGATCCTCT GGGGGCTGTG GCTCGCAACC TGCGGCATCG TCTTCCGGCG CATCCGGGCC GGGCTCGCCG GGCTCTCGCG CCTGGAGCGC TTCAAGGGCG CCCTCGGCCG GGTCATCGCG GCGCGCGCGT TCCCGGCGGA ACCGGACCGG ATCGTGAGGC TGCGGGACTT CGACGGCGGG CATCTCCTGC CGCTCAAGAT CGTCGGAGCG AATCTCTCGA CGCGGCAACT CACGCTCTTC TCGGCGGAGA CGACGCCCGA CATCGCCGTC GCGGACGCGG TGGCGGCCTC GATCAGCATT CCGATCGTCT TCGCGCCGCA GCGGATCGGC GCGGACGTGT TCGTCGACGG CGGCATCGTC TCGAACCTGC CCGCCTGGCC CTTCGACGAG GAGCGCGCCC TCGATCCGGA TGCCGTGACC CTGGCCTTCG AGATCGCCGA GGAGGTGCCG GAGAACGAGG AGCTCGGCGG CGCGGCGTGG CTGCCGGCCG CGATCCGGAC CGCCCTGTTC GGGTCCGGGA TCCTCAACCT GCGGGCGGTC GGCCGGTCGG AATTGATCAC CCTGAGAACC GATCTCGACG TCCTTCAGTT CGACCTCGGC CGGCAGGCCG CCCTGAGGCA GGTGGCCGAG TCCACGATCG CGGCGGATGT CGAACTGGAG TTGCGCCTGT TCGCGCGGCC GAGCCTGTAC CGACGCGCCT GCGAGACGAT GGTGAGGGCG GTCGAGGACA TCCTCGCCGG ACTGGACGGC ACCTCGCGCC GCGGGGCCGG CCCGCGCCGG GTGCGCGTGT CCCTGGCGAT GCCGGATGAC GGCCACGCGC GATCCCTTCG CCTGCGCTAC GGCGCCGGCT ACGACGCCGA TCTCGACGAG CGTCTCCTGC TGCCGCTCGA CGCCACCGTC GCGGGCCTGG CCTGA
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Protein sequence | MADRPVPEIP AFVAFAGGGA KGLVHVGALK ALETRAVDIR GVAGTSAGAI VAALKASGFS ADDMADPITG RTILDELARI DAALSTAPAL FGEGGWARVA RLRALLRCGL ARVAVAAALS VTLLLLGSFL CAAMANVAAA LILWGLWLAT CGIVFRRIRA GLAGLSRLER FKGALGRVIA ARAFPAEPDR IVRLRDFDGG HLLPLKIVGA NLSTRQLTLF SAETTPDIAV ADAVAASISI PIVFAPQRIG ADVFVDGGIV SNLPAWPFDE ERALDPDAVT LAFEIAEEVP ENEELGGAAW LPAAIRTALF GSGILNLRAV GRSELITLRT DLDVLQFDLG RQAALRQVAE STIAADVELE LRLFARPSLY RRACETMVRA VEDILAGLDG TSRRGAGPRR VRVSLAMPDD GHARSLRLRY GAGYDADLDE RLLLPLDATV AGLA
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