| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | M446_6338 |
|---|
| Symbol | |
|---|
| ID | 6135055 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium sp. 4-46 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010511 |
|---|
| Strand | + |
|---|
| Start bp | 6961171 |
|---|
| End bp | 6962358 |
|---|
| Gene Length | 1188 bp |
|---|
| Protein Length | 395 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 641646433 |
|---|
| Product | hopanoid biosynthesis associated glycosyl transferase protein HpnI |
|---|
| Protein accession | YP_001773037 |
|---|
| Protein GI | 170744382 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1215] Glycosyltransferases, probably involved in cell wall biogenesis |
|---|
| TIGRFAM ID | [TIGR03472] hopanoid biosynthesis associated glycosyl transferase protein HpnI |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.0080021 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGACTCCA CCTGGATCTC CACCCTGCTC CTCACCCTGG CGGCGGCGGG CTGCGCCTAC
GCCCTCGCGG CGGCGTGGCT CGCTGGCCGC GCGGCGGGGC GCCCGACGCC GACGCTCCCG
GCCGGCGCGG CCCGGCCCTC GGTCACGCTG ATGAAGCCGC TCTGCGGGGA CGAGCCGAAC
CTCTACGAGA ACCTGACCAG CTTCTGCCGC CAGGATTACG CCGGCCCGGT CCAGATCATC
TTCGGCGTGC AGAGCGCCGC CGACCCGGCC CTGGCGATGG TCGCCCGGCT CAAGGCCGAG
CACCCGGACC TGCGCATCGA CCTCGCGCTC GACGCCCGCC AGCACGGTTC GAACCGCAAG
GTGTCGAACC TGATCAACAT GGCCGGGCTG ATCGCCCACG AGGTCGTGGT GCTGGCCGAC
AGCGACATGG TGGTGCGCCC GGACTACCTG GAGCGCATCG TCGCGGAGCT CGGCCGGCCG
GGCGTGGCGG CGGTGACCTG CCTGTATCAC GGCGTGCCGG CCGAGCGGAG CGTCTGGGCG
CAGCTCTCGA CGCTGGCCAT CGACACGCAG TTCCTGCCGA ACGTGCTCGT CGGCACCGGC
CTCTCCCTGG CCGAGCCCTG CTTCGGCTCC ACCATCGCGT TCCGGGCCGA GGCGCTCGCG
GCGATCGGCG GCTTCGAGCG GGTGAAGGAC GACCTCGCCG ACGATTACGC GCTCGGCGCG
GCCCTGCGCG GGGCCGGGGG CGGGATCGTC GCCATCCCGA ACTTCACCAT CGGGCATACC
TGCGTCGACA CCTCGCTCTC GGACCTGTGG CGCCACGAGA CGCGCTGGAA CCGGACCATC
CGCAACGTCG ACCCGGCCGG CTACGCGGGC AGCCTCGTCA CCCACGCCTT CCCGCTCGCC
CTGATCGGCG CGCTGATGCC CAACACCAGC CCGCAGGGCC TCGCCATCGC CGCCCTGGCG
CTCACCTGCC GCATCGTCCT GTGCCTGCGG CTGGAGCGGG CCTTCGGCCT CGACCCGCAT
CCCTACTGGC TGCTGCCGAT CCGCGACCTG GTCTCGTTCG CCGGCTTCGT GTGGTGCTTC
GCCTCCGGCG CCGTGACTTG GAAAGGTCAC GATTATCGCG TTGTGGCTGA CGGCACGCTC
ATCCCCGAGC CGGGCCTCGC GCAGGAGACC GGCGCCCCCA CGACCTGA
|
|---|
| Protein sequence | MDSTWISTLL LTLAAAGCAY ALAAAWLAGR AAGRPTPTLP AGAARPSVTL MKPLCGDEPN
LYENLTSFCR QDYAGPVQII FGVQSAADPA LAMVARLKAE HPDLRIDLAL DARQHGSNRK
VSNLINMAGL IAHEVVVLAD SDMVVRPDYL ERIVAELGRP GVAAVTCLYH GVPAERSVWA
QLSTLAIDTQ FLPNVLVGTG LSLAEPCFGS TIAFRAEALA AIGGFERVKD DLADDYALGA
ALRGAGGGIV AIPNFTIGHT CVDTSLSDLW RHETRWNRTI RNVDPAGYAG SLVTHAFPLA
LIGALMPNTS PQGLAIAALA LTCRIVLCLR LERAFGLDPH PYWLLPIRDL VSFAGFVWCF
ASGAVTWKGH DYRVVADGTL IPEPGLAQET GAPTT
|
|---|
| |