Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | M446_6318 |
Symbol | |
ID | 6129787 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium sp. 4-46 |
Kingdom | Bacteria |
Replicon accession | NC_010511 |
Strand | + |
Start bp | 6943735 |
End bp | 6945099 |
Gene Length | 1365 bp |
Protein Length | 454 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | 641646413 |
Product | patatin |
Protein accession | YP_001773017 |
Protein GI | 170744362 |
COG category | [R] General function prediction only |
COG ID | [COG1752] Predicted esterase of the alpha-beta hydrolase superfamily |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.105916 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.00104777 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTCGGGAT CGACCCGGCG GCGCGGCATG GCCTGCGCCG CGATTCTGCT CCTCGGGGCG GGCCTCGCGA CGCCGGCGAC GGCCGGCAAC CCGGCGGCCC CCGGACGGCG CGGCGACGCC CGCACCGAGT TCGCCCGCAC CGAGTTCACG GCCGGCGACC TCGCGGCGGC GCGGCCCGAG GGTCTGCCCG CGCAGGTCCG CCTGAACGGC GACGACCCCG CCGCCTTCCG CGACCTCCTG GCCGGGGCGC CGCGGGCCGG GCAGGCGCCC TGGCTCGTGC TCTCGGGCGG GGGCGAGAAC GGCGCCTACG CGGCGGGTCT GCTGAAGGGC TGGAGCGGCG CCGGGAACCG GCCGGATTTC GGCGTCGTCA CGGGGGTCTC GACCGGCGCG CTGATCGCCC CCTTCGCCTT CGCGGGCGCC CGCTACGACG CGGCCCTCGA ACAGGCCTAC ACGCAGACCA CCGCCGCGGA CGTGTTCGAG TTCGGGGGCA GCGACGCGGC GCTCACCGAC ACCTGGCCGC TGAAGCGCCA GATCGAGAAG AGCGTCACGC CCGCGCTCCT CGCCGAGGTC GCGGCCGAGC ACCGCAAGGG CCGCCGCCTC CTGGTGGCGA CGACCGAGCT CGACAGCGGC CGCCCGGTCC TGTGGGACAT GGGGGCCATC GCCGGGATCG GCGGGCCCGC CGGGCTCAAG CTGTTCCGCG AGGTGATGCT CGCCTCGGCG GCGGTCCCCG GGCTCTTCCC GCCGGTGATG ATCGACGCGG CCGGCCCGTC CGGCAAGAGG TTCCAGGAGA TGCACGCGGA CGGCGGCACC ACCGCCCCGT TCTTCCTGGC GCCGGGCCGC CAGATCCTCG GGGAGGAGCC GGGCGGCCTG CCCGCGCCCG CCGTCTACCT CGTCGTCAAC AACAGCCTCG CGCCCGATTT CCAGGTCGCC TCGCGCACGA TGCTGAGCGT CCTCGGCCGC TCGCTCTCGG CGGCGATCCG GGCCCAGACC GCCGCGGCGG TCGCGCTCGC CCGCGGCTTC GCGGGCCGCA CCGGCCTGAC GCTGCACGTG GCGCTGATCG ATTCCCGCTT CAGCCGCCGC TCGCCCGCGC CCTTCGACCA GGGCTACATG CGGGCGCTCT TCGCCCATGG CGAGGCGCTC GGGCGCGACG GCACGGCCTT CGACTGGCGG CCGGACGCCG TCACCACGAG CGCGATCGAG GGCAAGGGCG GCGAGGCCGA GGCCAAGCGC GGCGAAGCCG AGGTCAAGGG CGGCGAAGCC GAGGTCAAGG GCGGCGAAGC CGAGGTCAAG GGCGGCGAAG CCGAGGTCAA GGGCGGCGAG ACCGCACGGA AGGGCACGGA CCGGCGCGCC GAGGCGGCGC GCTGA
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Protein sequence | MSGSTRRRGM ACAAILLLGA GLATPATAGN PAAPGRRGDA RTEFARTEFT AGDLAAARPE GLPAQVRLNG DDPAAFRDLL AGAPRAGQAP WLVLSGGGEN GAYAAGLLKG WSGAGNRPDF GVVTGVSTGA LIAPFAFAGA RYDAALEQAY TQTTAADVFE FGGSDAALTD TWPLKRQIEK SVTPALLAEV AAEHRKGRRL LVATTELDSG RPVLWDMGAI AGIGGPAGLK LFREVMLASA AVPGLFPPVM IDAAGPSGKR FQEMHADGGT TAPFFLAPGR QILGEEPGGL PAPAVYLVVN NSLAPDFQVA SRTMLSVLGR SLSAAIRAQT AAAVALARGF AGRTGLTLHV ALIDSRFSRR SPAPFDQGYM RALFAHGEAL GRDGTAFDWR PDAVTTSAIE GKGGEAEAKR GEAEVKGGEA EVKGGEAEVK GGEAEVKGGE TARKGTDRRA EAAR
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