Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | M446_6288 |
Symbol | |
ID | 6129752 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium sp. 4-46 |
Kingdom | Bacteria |
Replicon accession | NC_010511 |
Strand | + |
Start bp | 6906620 |
End bp | 6908554 |
Gene Length | 1935 bp |
Protein Length | 644 aa |
Translation table | 11 |
GC content | 80% |
IMG OID | 641646384 |
Product | DNA repair ATPase-like protein |
Protein accession | YP_001772988 |
Protein GI | 170744333 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0419] ATPase involved in DNA repair |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0357583 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.430633 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCCCTG CGGAGGCCGC GGCCGCCCTC GACCGGCTCG GCCGCGCGCT CGCGCGCGCC GAGGCGCGCC GGGCCGCCCT GACCGGGGAG CGCGACGGGC TGGTCCGGGC GGTCGCGGCC GCCAAGGGCC GGCTGGAGCG GCGCGACGCG GTCGATCTCT GCCTGCGCGA GCTGCAGCAG GAGACCCACC AGCGCAGCCT CGCCCGCATC GAGACCCTGC TCTCGGCCGT GGTGCAGGAG GTGCTGCCGG GGGAGAAGCC GGTCTCCCTC GACCTCACCA CGGAGCGCGG CCTGCCCGCC CTCGACATCG GCCTGCTGCG GCCGGACGGC GGCCGCGAGG ACGTGCTGGA GGACAATGGC GGGGCCATGA CCAACGTGGT CGGGATGGGC CTGCGGCTGA TCGCGGTGGT CAAGGCGGGT TTGGGGCGCT TCATCGCCCT CGACGAGGCC GATTGCTGGA TCGCGCCGGC GCGGGTGCCG GCCTTCTACC GGGTGCTGGA GGACGGGGCG GCGCGGCTGT CCCTGCAATG CCTCGCCATC TCGCACCACG ACGTCACGGG CTTTCCGCCC GGCACGCGGG TGAGCCGCAT CGGCGGCGAC CCGGCGCGCG GCGTGCTGAT CGACGGCCCG GCCGAGGAAT GCGCCGCCGC CTGGGAGCCC GACGCGCCGG GCTTCCGCCA CATCCGCCTG ATCGACGTGC AGGGCTTCGC CGACGCGGTC CTGCCCCTCG CGCCGGGCGT CAACGCGCTG GTGGGGCCGA ACAACCGCGG CAAGTCGACG GTGATCCGGG CCCTGCGCGC GGTCTTCTAC GGCGAGGCCC GCGACGGGCT GGTGCGGGCC GGCAAGCCCG CCTGCCGGAT CGAGATCGGG GTGGCGGGCG GCCGGATCCT GCGCTTCGTG CGCCAGGTTC GGCGCTCGCC CGTCAACCTG TGGTCGCTGC ACGAGCCGGA CGGATCCCTG GTCCGCCAGG ACGGGGCGAC GCTGGAGACC GGCGGCCGGG ACGTGCCGGA CTGGGTCGAC CGGCTCTTCG GCATCACCCG GGTCGAGGAG CTGGAGGTCC ACGTCGCGCA CCAGAAATTC CCGGTCTTCC TCCTCGGCGA GAAGGCGCCC AAGCGCTCCG CCGTGCTCTC GCTCGGCCGG GAGGCCGGCT ACATCCGCGC CATGCAGGAC CTCCAGCGCG AGCGCGTGGC GGAGGACCAG CGCGCCGTGC GCGAGGGCGA GCGGCGCCTC GCTCTCCTGG CCGAGCTCCT CGCCCCCCTG GCCGGACTCG AGGCGGCGGC CGCCTCCCTC GCGGCCCTGC GCGAGGAGGC CGGGCGCCTC GCCGAGGGCG AGCGGCGCCT CGCCGGAATC GAGGCCGGGC TGAGCGCCCT GGCGCGGCTG CGCGCCGCCC GGGACGCGGC CTCGGGCCGG GCCCGGGCCC TCGCGGCCCT GCCGGGCCCG GAGGTCCCGG CCGACCTCGC CCGCGGGCTC GCCGAGGCGC GCCACCGGGA GGGCGTGGGG GAGCGTCTCC TCGGCCTGTC CCGGGACCTC GCCCGCGCGC GGGCCCAGCT GGCGGCCCTG GCGGGCCTGC CGGCGGCGCC GGTGCCGCGG GCGAGCGCCG CCGCCGAGGC CCACGCCGCC GCCCTGGCGC GCCTCGCCGC CGACCTCGCC CGGGCGCGCG CCCGGGCGGC GGCGCTCGCG GCCCTGCCCG AGGCGGCGCC GGCCCTCGCC GCGCCGGAGG CGGCCCTGCG CGGCGCCCGG CGCCTCGCGG AGCTCGGCCG GCAGCTCGCC GCGGCGCGGG GGCGGACGGC CGAGGCGCGG GCGGGCCTCG CCGCGATCGA GGCCGAGACC GCGGCGCTGC TCGCCGCGAC CGGCGGGCGC TGCCCGGCCT GCGGCGGCAC AGCCGCCCCG GAGAGCCTGC TCGACGGGCA CCGCCACGCG GGGGCGGCCG CGTGA
|
Protein sequence | MSPAEAAAAL DRLGRALARA EARRAALTGE RDGLVRAVAA AKGRLERRDA VDLCLRELQQ ETHQRSLARI ETLLSAVVQE VLPGEKPVSL DLTTERGLPA LDIGLLRPDG GREDVLEDNG GAMTNVVGMG LRLIAVVKAG LGRFIALDEA DCWIAPARVP AFYRVLEDGA ARLSLQCLAI SHHDVTGFPP GTRVSRIGGD PARGVLIDGP AEECAAAWEP DAPGFRHIRL IDVQGFADAV LPLAPGVNAL VGPNNRGKST VIRALRAVFY GEARDGLVRA GKPACRIEIG VAGGRILRFV RQVRRSPVNL WSLHEPDGSL VRQDGATLET GGRDVPDWVD RLFGITRVEE LEVHVAHQKF PVFLLGEKAP KRSAVLSLGR EAGYIRAMQD LQRERVAEDQ RAVREGERRL ALLAELLAPL AGLEAAAASL AALREEAGRL AEGERRLAGI EAGLSALARL RAARDAASGR ARALAALPGP EVPADLARGL AEARHREGVG ERLLGLSRDL ARARAQLAAL AGLPAAPVPR ASAAAEAHAA ALARLAADLA RARARAAALA ALPEAAPALA APEAALRGAR RLAELGRQLA AARGRTAEAR AGLAAIEAET AALLAATGGR CPACGGTAAP ESLLDGHRHA GAAA
|
| |