Gene M446_6088 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_6088 
Symbol 
ID6132796 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp6688508 
End bp6689557 
Gene Length1050 bp 
Protein Length349 aa 
Translation table11 
GC content77% 
IMG OID641646186 
Productpolysaccharide deacetylase 
Protein accessionYP_001772798 
Protein GI170744143 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.217095 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00305245 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCCCACCT TCACCGCGGC CCGCCGGGAC CTGCCGGGAT TGCCCGGCTG GGACGCCCTC 
GCGCCGGGTC CGGCCGCCCT GCCCCGGGCC CTGGCGGCCC GCGCGGGCGC GCGGCTCGGG
CCCCGCGGCT GCCTCCTGAC CTTCCACCGG GCGGTCCGGG CGGAGGACTG GGCCGACATG
CCGAATCGCG GCTTCCACCT CGATCTCGGC TATCTCGACC GGCTCCTCAC CCATCTGCGC
GCGACCGGCT GGGACGTCGT CACCCTCGAC GAGGCCCTGC GCCGGGCGGC CGACCCGGAC
CATCGCGGCC GCTTCGTCAA CGTCTCGATC GACGATTGCT ACCGCGACAC GGTCGAGGCG
GTGGTGCCGC TGTTCCGCCG GCACGGCGTG CCGGTGACGC TGTTCCTCAC CACCGGCATC
CCGGACGGAA CCCTGCCGCT CTGGGGGGCC GGGCTGGAGG ATGTGCTGCG CGCGCGCGAC
GCGGTGCGCC TGCCCGGGGG CTCCCTGCCG CTGCCGGACC CGGCGGCCAA GCGCGCGGCC
TATGCGCGCC TCGCGGCGGC GTTCGACGGC CCGCGGGCCG GGGCGCATTA CCGGACCTTC
TGCCGCCTCA ACGGCGTCGA CGAGGAGGCG ATGCACTGGC GCCACGCCGT GACCTGGGAG
ATGCTCGCGC CCCTCGCGGA CGATCCCCTG GTGGAGATCG GCGGCCATAC GGTGAGCCAT
CCCCGCATCG CCGCCCTCGA CCCCGAGGCC GCCTTCCGCG AGATCGCGGA GTGCCGCGAG
CGGATCGGCG CGCGGCTCGG GCGGGAGGCG CGCCACTTCG CCTTCCCGTA CGGGCGCCGG
GGGGATTGCG GCCCGCGCGA CTTCGCGCTG GCGCGCCGGG CGGGCTTCTC CAGCGCCGCG
ACCACCCGCA AGGGCCTCGT GCGCCGCGGT CAGGACGCCT GGAGCCTGCC GCGCAACACG
CTCAACGGCG CCCGTCGCAG CCTCCTCGCC GCCGAGGCGC ATCTCACCGG CGCCACCGGC
GCCCTCGCCC GGGTACTTGG CCGTGACTGA
 
Protein sequence
MPTFTAARRD LPGLPGWDAL APGPAALPRA LAARAGARLG PRGCLLTFHR AVRAEDWADM 
PNRGFHLDLG YLDRLLTHLR ATGWDVVTLD EALRRAADPD HRGRFVNVSI DDCYRDTVEA
VVPLFRRHGV PVTLFLTTGI PDGTLPLWGA GLEDVLRARD AVRLPGGSLP LPDPAAKRAA
YARLAAAFDG PRAGAHYRTF CRLNGVDEEA MHWRHAVTWE MLAPLADDPL VEIGGHTVSH
PRIAALDPEA AFREIAECRE RIGARLGREA RHFAFPYGRR GDCGPRDFAL ARRAGFSSAA
TTRKGLVRRG QDAWSLPRNT LNGARRSLLA AEAHLTGATG ALARVLGRD