Gene M446_5974 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_5974 
Symbol 
ID6131339 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp6560916 
End bp6561398 
Gene Length483 bp 
Protein Length160 aa 
Translation table11 
GC content78% 
IMG OID641646075 
ProductNlpC/P60 family phage cell wall peptidase 
Protein accessionYP_001772687 
Protein GI170744032 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0791] Cell wall-associated hydrolases (invasion-associated proteins) 
TIGRFAM ID[TIGR02219] putative phage cell wall peptidase, NlpC/P60 family 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.858735 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.204612 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGCGG ATCCTCATCT CACCCGCGCC CGCGTGGTCG CGACCGCCCG GGCGTGGCGC 
GGCACGCCCT ACCACCACCA GGCGGCGCTG AAGGGGCTCG GCTGCGACTG CCTCGGCCTG
GTGCGGGGCG TCTACGCCGA ACTCTACGGG CGCAGCCCCG AGGAGCCGCC CCCCTACGCC
CCGGGCTGGG CCGAGAGCGC CGCGCTCGGA CCGGACGGCC CGGCCGAGCC CCTGCGCGAC
GCCGCCCGCC GCCACCTCGC CGAGATCCCG CCCCCCGAGG CGCTGGCCGG CGACGTCCTG
CTCTTCCGCT GGCGCGACGG CCTGCCCGCC AAGCACTGCG CCATCCTCAC CGCCCCCCTC
GCCGGGCCGG CGCCCCGGAT GCTCCACGCC TATGACGGCC ACGCCGTCCT CGAATGCAGC
CTCCCCCGCG CCTGGTCGCG GCGCATCGCC CACGCCTTCC GCTTCCCGGG CCTCCGCGCA
TGA
 
Protein sequence
MNADPHLTRA RVVATARAWR GTPYHHQAAL KGLGCDCLGL VRGVYAELYG RSPEEPPPYA 
PGWAESAALG PDGPAEPLRD AARRHLAEIP PPEALAGDVL LFRWRDGLPA KHCAILTAPL
AGPAPRMLHA YDGHAVLECS LPRAWSRRIA HAFRFPGLRA