Gene M446_5642 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_5642 
Symbol 
ID6131187 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp6190516 
End bp6191751 
Gene Length1236 bp 
Protein Length411 aa 
Translation table11 
GC content71% 
IMG OID641645756 
Productextracellular ligand-binding receptor 
Protein accessionYP_001772370 
Protein GI170743715 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.324496 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGTTCG TCGGGCGGTC GGGGTGCGGG ATCATGGCTG GAGCGTGGAC GCGTCGGGTC 
GTTCTGGGCT GCCTCGCGGC GGCGTCACTC TCGTCGCCGC TCCGGGCCCA GGAGGTGCTC
AAGATCGGCG CCGCCGTCAG CCTGAGCGGC GCCTTCTCCC GCGAGGGCGG CCTGCTCCGG
GATGGCTACG AGCTCTGGCG CGAGCGCGTG AACGCCGCCG GCGGCCTGAA GGCCGGGGGC
AAGACCTACA AGGTCCAGGT CGTCTACTAC GACGACGAGT CGAAGGCGCA GACGAGCGCC
CAGCTGACCG AGAAGCTCGT GAGCGACGAC GGCGTCTCGC TCGTCTTCGG GCCGTACTCA
TCGGGCATCG CCACCGCGAC CGCGGTGATC AGCGAGCGCT ACCGGGCGCT CACCCTGGCC
CCGATGGCCA CCGCCAACAG CCTCTACGCG CGCGGCTACA AGTACCTCTT CACGCCCTCG
CCCCTCGCGG ATCAGGGGCT GGTGCCGATC CTCGACCTCG CCAAGGACCT GAAGCCCGCG
CCGGGGACGG TGGCGATCGT CGGGCCCGAC GACCTGTTCC CCAACATCAC CGGCGAGGGG
GCCCGCAAGC GCGCCGAGGC CCTCGGCCTC AAGGTCGTCT ACACCGGCAA GTACCCGAAG
GGGGCGAACG ACCTCTCGGC GGTCGCGACG CAGATCAAGG CGGCCGCCCC CGACATCCTC
CTGGCGACCG GCTACGTCCA GGACTCGATC CTCCTGGTCA AGTCCCTGCG CGAACTGCAG
GTCGCGCCCA AGCTCGTCGG GCTCGCGACC GCGGTCGGCG TCCAGGACTT CCGGACGGCG
GTGGGTCCGG CGGCCGAGGG CATCATGGGC GTCGACTACT GGGTGCCGAC CCTGACCTGG
AAGGATCCGG TCTTCGGGGA CAGCGCCGGC TTCGCGAAGG CGTTCGAGGC AAAGTACGCC
AAGGCGCCCA CCTTCCACGC GGCGAGCGGC GCCGCGGCCG GCGTGGTGCT GCAGCTCGCG
ATCGACAAGG CCGGGTCGGT CGATCCCACG GCAGTCCGGG ACGCGCTCCT GTCGATGCAG
GGCGAGACCT TCTACGGACC GTTCAAGTTC GACGCCAACG GCGTGAACAC GCGGGCCGGA
CTCAACGTCT CGCAGATCGT CGGCGCTGAG CCCAAGGTGA TCTACCCCTT CGCGGTCAAG
CAGGCGGACC CGGTCTACCC GCGCGCGGTT CCCTAG
 
Protein sequence
MRFVGRSGCG IMAGAWTRRV VLGCLAAASL SSPLRAQEVL KIGAAVSLSG AFSREGGLLR 
DGYELWRERV NAAGGLKAGG KTYKVQVVYY DDESKAQTSA QLTEKLVSDD GVSLVFGPYS
SGIATATAVI SERYRALTLA PMATANSLYA RGYKYLFTPS PLADQGLVPI LDLAKDLKPA
PGTVAIVGPD DLFPNITGEG ARKRAEALGL KVVYTGKYPK GANDLSAVAT QIKAAAPDIL
LATGYVQDSI LLVKSLRELQ VAPKLVGLAT AVGVQDFRTA VGPAAEGIMG VDYWVPTLTW
KDPVFGDSAG FAKAFEAKYA KAPTFHAASG AAAGVVLQLA IDKAGSVDPT AVRDALLSMQ
GETFYGPFKF DANGVNTRAG LNVSQIVGAE PKVIYPFAVK QADPVYPRAV P