Gene M446_5632 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_5632 
Symbol 
ID6131323 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp6177952 
End bp6179370 
Gene Length1419 bp 
Protein Length472 aa 
Translation table11 
GC content68% 
IMG OID641645748 
Producttranscriptional regulator 
Protein accessionYP_001772362 
Protein GI170743707 
COG category[E] Amino acid transport and metabolism
[K] Transcription 
COG ID[COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCAAAG CGCTGACGTT AAGCCTCGAC CGATCGGCGC AGCGTTCGCT GGCCGAGCAG 
ATCCAGCTGG GGATCTCCAA GGCCATCAAC GATGGCGTGC TGAGCCCCGG CGCGCGATTG
CCATCATGGC AGGACCTCGC GGCGCAGCTC GGGGTGGCCC GCGGGACGGT GCGGACGGCC
TACGAGAAGC TCGCCGCCGC CCAGCTGATC GAGGCCTCCC GCGCCACGGG CACGCGCGTC
GCACAGCGGC CTCGAAGCCG AGCGGGCGGC GGGGAGCCCG CAGACGCGGG GCCGTTCATT
GCAGCCTACG AGGCAATGAT CCAGGGACCG GCTCACTTCC AGATGGGAGT GCCGGGGAGC
GATACCTTCC CGGCGACCCT CCTGTCGCGC CTTCGTGCGC GCGCGGTACG CGCCGAGGCG
AGCGCCTCGC CGCTCTATCC AGACCCGAGG GGCGAGCTCG ACCTCAGGCG CGAGATCGCA
GGCTATCTGG CCGTCGCTCG AGGGCTCGCT TGCTCGCCCT CCCAGGTGAT CATTACGGCT
GGGTTCGGTG GGGGACTCGG CCTGACGCTC CACGTCCTTG GCCTCGACGG CCGCAAGGCA
TGGATGGAGG ACCCCGGCTT CCCTTGGTCT CGAAGGGCTC TGGAGCTCGC GCGCCTGTCG
CTCGCGCCGA TCCCGGTCGA CGCAGACGGA ATGGATGTCG ACCAGGGGCT GCGCCTCCAT
CCGGACGCCA AACTTGTGCT GGTGACGCCC GGTCAGCAGG CGCCTCTAGG TGGCGCTCTT
TCGCTTGAGA GACGCCTTCG TCTCTTGGAG TGGGCCTCGA CGAACCGTGC CTGGATCATC
GAGGACGACT ACCTCAGCGA GCTGCAATTG TCGGGGCGGG CTGCGCCGGC GCTCGCCTCG
CTCGATCGCG CGGGCCGCGT CATCCACATC GGCTCATTCA GCAAGACGAT CAGCCCTAGC
CTGCGGCTCG GTTTCGTGGT CGCGCCCGCC GAAATGGTCT CGCGGTTTGC TGAGACGGCC
GCGTGCCTCT CGCCGCCGCC GGGTCCGTCG GTCCAACTTG CGATCGCCGA GTTCATGCGC
GAGGGGCACT ACATGCGTCA TCTGAGGCGC ACCAAGCGCG CCTACGCCAC GAAACGGCAG
GCGGTGATAG AGCGCCTCAG GGGCTTTGTC GCCGCCGATC AGCTCACGAC GTCCGGGTTG
GCCGTACTGC TGAGGTTGCC CGGCTCGACG TCCGACCTGC GTGTGGCGAG CGAGGTCTGG
CTGCTCGGCA TGTCCCCAAC GCCTCTTTCG CCCTGGTATA CGTCATTGGA CGGAGCCAGG
TCGGCGCTTC TGCTGGGGGT CGCGACCGCG CCGACAAAGG ACCTCGACCG CGTGTGCGAA
CGGCTGGTTC AGGCGATTGA ACGATGTACC CTGCGGTAG
 
Protein sequence
MAKALTLSLD RSAQRSLAEQ IQLGISKAIN DGVLSPGARL PSWQDLAAQL GVARGTVRTA 
YEKLAAAQLI EASRATGTRV AQRPRSRAGG GEPADAGPFI AAYEAMIQGP AHFQMGVPGS
DTFPATLLSR LRARAVRAEA SASPLYPDPR GELDLRREIA GYLAVARGLA CSPSQVIITA
GFGGGLGLTL HVLGLDGRKA WMEDPGFPWS RRALELARLS LAPIPVDADG MDVDQGLRLH
PDAKLVLVTP GQQAPLGGAL SLERRLRLLE WASTNRAWII EDDYLSELQL SGRAAPALAS
LDRAGRVIHI GSFSKTISPS LRLGFVVAPA EMVSRFAETA ACLSPPPGPS VQLAIAEFMR
EGHYMRHLRR TKRAYATKRQ AVIERLRGFV AADQLTTSGL AVLLRLPGST SDLRVASEVW
LLGMSPTPLS PWYTSLDGAR SALLLGVATA PTKDLDRVCE RLVQAIERCT LR