| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | M446_5608 |
|---|
| Symbol | |
|---|
| ID | 6132513 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium sp. 4-46 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010511 |
|---|
| Strand | + |
|---|
| Start bp | 6151346 |
|---|
| End bp | 6152911 |
|---|
| Gene Length | 1566 bp |
|---|
| Protein Length | 521 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 641645728 |
|---|
| Product | transcriptional regulator, CadC |
|---|
| Protein accession | YP_001772342 |
|---|
| Protein GI | 170743687 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG3710] DNA-binding winged-HTH domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 49 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCTACC TGTTCGACGA GTTCGAACTC GATGCGGACC GGGTCGAGCT GCGCCGTCAC
GGGCTGATTG TGCCTGTCGA GCGGCAGGTC TTCGGGCTGC TCCTGCTCCT GGTGGAGAAC
CGGGACCGTA TGGTGCCCAA GGAGGAGATC ATCGCGAAGG TGTGGGGCGG CCGGATCGTG
TCGGATTCCG CCCTCTCAAG CCGGGTCAAG TCGGCGCGAC GCGCACTGGG CGACGACGGC
AAGGAACAGC GGCTCATTCG CACCCTGCAC GGCCAGGGCT TTCGCTTCGT CGCGGACGTG
ACGACAGAGG GACACCGATC GCTGCCGCCG GCGCGCGCCC TGGACCCCGC CGAGACGCGA
CCAGGGCCGG CAGGGCATTC GAGGCCATCC ATCGCCATTC TTCCATTCCA GCTCGTTGCC
GCCTCGGATC TTCATCCGGC CCTCGGCGAG GCTCTCGCTC ATGACCTCAT CGTCGCTCTC
TCCCGGTTGC GATGGCTGTT CGTCATTGCG CGCGGCTCCT CGTTCCGGTT CCGGTCGGAA
CATCCGGACG CCTGCCGCAT CGGACACTTG CTCAACGCCA GCTACTGCCT CAGCGGCGTC
GTCGAGACCG CGGCGAGCCG CGTCCTGATC ACGGCCGAAC TCACCGATAC GCGGACCGGA
GAGGTGCTCT GGGCAGACCG CACTGCCGGT CCGATCGACG GCATTCACGA GATGCGGGCT
CGGATCGCGG CGAACATCAT CTCGGCCCTC GAACTCCAGA TTCCGCTCCA CGAAGCGGCT
CTCGCGAGCC TTGCGGCACC GAGTTGCCTG AATGCCTGGT CCGCTTATCA CCTGGGCCTG
CGGCATCTCC ACCGATTTAC CCGTGAGGAC AATGCCGCCG CGGCGGCCCT GTTTGAGCGC
GCTCTCGCCC TCGACCCCGG TTTCGCTCGA GCCAATGCCG GGCTGTCCTC GACACATTTC
CAGAGCGCGT TTCTTCGCTA TTCCGGCGAC CCGGCCGGCG ATACCAGGGC TGCGCGAGCC
TTCGCGGAGC GCAGCGTGGA CCTTGATCCG CTCGATCCGT TCGCCAACTT CACGATGGGC
CGGTCCTTCT GGCTGACGGG GGACGTCGAC CGGAGCTTTC CCTGGCTGGA TCGGTCGACG
GTGCTCAGTC CCAGTTTCGC TCAGGGTTTC TATGCGCGAG CCTGGGCCGA TGCGATCTCC
GAACGGGATC TGAATGGCAT GGAGAACGTC GAGATCGCGA TGTCTCTCAG CCCGCTTGAT
CCCTTCTTCT ATGCTATGCT GGCGACCCGG GCGCTGACGT GCCTGATCCA GGGCGATGTC
AGGCAAGCTG CCGTCTGGGC CGATCGAGCG GCGCAGTCAC CCGGCGCGCA CGTGATGATC
TCGCTCATCG CCGTCATTGC CCATACGTTG AACCAGGATC GTGATCGTGC GGCGGTCTGG
AGCGCTGACG TACGGCGGCG CCGCGGCGAC ATCTCTCAGG CGCATTTCTT CACTTCGTTT
CCATTCCGAC ACGGACCGCT CCGTCTTCGC ATGGCGAAGG CTCTGGACGA TAACGATATC
CGTTGA
|
|---|
| Protein sequence | MPYLFDEFEL DADRVELRRH GLIVPVERQV FGLLLLLVEN RDRMVPKEEI IAKVWGGRIV
SDSALSSRVK SARRALGDDG KEQRLIRTLH GQGFRFVADV TTEGHRSLPP ARALDPAETR
PGPAGHSRPS IAILPFQLVA ASDLHPALGE ALAHDLIVAL SRLRWLFVIA RGSSFRFRSE
HPDACRIGHL LNASYCLSGV VETAASRVLI TAELTDTRTG EVLWADRTAG PIDGIHEMRA
RIAANIISAL ELQIPLHEAA LASLAAPSCL NAWSAYHLGL RHLHRFTRED NAAAAALFER
ALALDPGFAR ANAGLSSTHF QSAFLRYSGD PAGDTRAARA FAERSVDLDP LDPFANFTMG
RSFWLTGDVD RSFPWLDRST VLSPSFAQGF YARAWADAIS ERDLNGMENV EIAMSLSPLD
PFFYAMLATR ALTCLIQGDV RQAAVWADRA AQSPGAHVMI SLIAVIAHTL NQDRDRAAVW
SADVRRRRGD ISQAHFFTSF PFRHGPLRLR MAKALDDNDI R
|
|---|
| |