| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | M446_5469 |
|---|
| Symbol | |
|---|
| ID | 6131822 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium sp. 4-46 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010511 |
|---|
| Strand | - |
|---|
| Start bp | 6000147 |
|---|
| End bp | 6002735 |
|---|
| Gene Length | 2589 bp |
|---|
| Protein Length | 862 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 641645603 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001772219 |
|---|
| Protein GI | 170743564 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG3127] Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.18562 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.18 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCACGGCA GCCTGCCTCC CCTGAGCGCC CCCGGGCGCC GCCCGGCGGT CCCGTCGCGG
CTCCCGCTGA TCCTGCGCCT CGCCCTGCGC GAGCTGCGCG GGGGGCTCGG CGGCTTCGCG
GTCTTCCTCG CCTGCCTGGC CATCGGGGTC GCGGCGATCT CCGGCGTCGC CTCGGTGTCG
CGCTCCCTCA CCCGGGGCCT CGCCGAGCAG GGCCGGACCA TCCTGGGCGG CGACCTCGCC
TTCGGGTTGA TCCACCGGGA GGCGAGCCCG GCGGAGCGGG CCGTCCTGGA GGCGAAGGGC
CGCGTCTCCG TGGTGGCCTT CACCCGCGCC ATGGCGGTGG CGGGGGAGAA GGGCGCGGCG
CTCGTCGAGC TGAAGGCCGT CGGGCCGGAT TACCCTTCCT CCGGCGACCT CGTCACCGCG
CCGGCCCTCC CGCGCGAGAC CCTACTGGCG GAGCGCGACG GCGCCTTCGG GGCGGCGGTC
GATCCCGCCC TCCTCGCCCG CCTCGACCTC AAGATCGGCG ACCGGGTCAC GGTCGGGAGC
GCCACGATCG CGCTCAGGGC CGTGCTGCAG GCCGAGCCGG ACAAGATCGC CAACGGGATC
GGCTTCGGGC CGCGCCTGCT GACCAGCGAG GCGGCCCTGC GGGCCTCGGG CCTGCTCCAG
CCCGGCAGCC TCAACCGCTG GGTCTACCGG GTCCGGCTCG CCGATCCCTC CGACGCGGAG
GTCGAGCGGG CCGCGGACGC GGTGCGCGCC GCCCTGCCGG AGGCGGGCTG GGAGATCCGC
TCGCGGCTCA ACGCCGATCC GCGCTTCGCC CGCAGCGTCG AGCGCTTCAC CCAGTTCCTC
ACCCTGGTCG GGCTCACGGC CCTGATGGTG GGCGGCGTCG GCGTCGCCAA CGCGGTGCGC
GGCTTCGTCG AGCGCAAGCG CGCCTCGATC GCCACCCTGA AGAGCCTCGG CGCCCCCGGC
GGGCAGGTCG TCGCCCTCTA CCTGACGCAG GTCATGCTGA TCGCCGCGAT CGGCATCGCG
ATCGGGCTCG CGGTCGGCAC CGCCCTGCCC TACGGGCTCG TCCTCGCCTT CGCGGACCTG
CTGCCGGTGC CGCTCACGCC CACGCTCGCC CCCGGCGAGC TGGCGGTGGC GTCCCTCTAC
GGGTTCCTCA CCGCCCTGGC CTTCGCGATC GGACCCCTCG GGCGCGCCCA CGACGTCGCG
GTGTCGGGGC TGTTCCGCGA CACGGTCGAT CCCGAGCGGC GCTGGCCGCG CCCGCGCTAC
CTCGTCGTGC TCGGCCTCGC CCTCGCGGGG CTGGTGGCGC TCGCCCTCCT CACCGCCTTC
GACCGCCGGG TCGCCCTGAT CTTCATCGTG GCGGCGGGCC TCGCCTTCGG CCTGCTGCGG
GGCGTCGCCC TCGCCCTGAT GGCGCTGGCC CGCCGGCTGC CGCGCCCGCG CGGCGCCGCG
CCGCGGCTCG CCCTCGCCAA TCTCCACCGC CCGGGCGCGC TCACGCCCTC GATCGTGCTC
TCGCTCGGGC TCGGCATCAC GCTCCTGGTG GCGCTGAGCC TGATCGACGC CAGCATCACC
CGCACCCTGA CCCGCTCGCT GCCCTCCCGG GCGCCGAGCC TGTTCTTCCT CGACATTCCG
GGCCGGGACG CCGCGGCCTT CGACCAGTTC CTCGGCGGCG AGGCGCCGCG GGGCAAGATC
GAGCGGGCGC CGATGATGCG CGGGCGCATC GTCGCCCTCA ACGGGCGGCC GGCGAGCGAG
ATCAAGGCGC CGGAGGACGC CGCCTGGGTG CTCGACGGCG ACCGGGGCAT CACCTACGCG
CAGGACCTCC CCGACGGCTC GCGGGTGACC GAGGGGGCGT GGTGGAATCC CGAGCAGGCC
GCGACGCCGC TGGTCTCCTT CGACGACCAG CTCGGCCGGG CCCTCGGCCT CAAGGTCGGC
GACAGCGTCA CGGTCAACGT GCTCGGCCGC AACCTCACCG TGAAGATCGC CAATCTGCGC
CACGTGGAAT GGCGCACCCT CGGCATCAAC TTCGTGATGG TGTTCTCGCC CGGCACCTTC
CGGGGGGCGC CGCACGCCGA CCTCGCGACC CTGACCCTGC CGGAGGGCCC GGACCCGGCC
CTGGAGGCGA GGATCCTGCG GGAGGCCGCC CTGCGCTTCC CGTCGGTGAC CAGCGTGCGG
GTGAAGGACG CCCTCGACGC GGTGAACGAC ATCGTCGGAA AGCTCGTCTT CGCGATCCGC
GGCGCGAGCG GCGTCGCCCT CGTGGCGAGC CTGTTCGTGC TCGCGGGCGC GCTGGCGGCG
GGCCACCGGG CGCGCCTCTA CGACGCGGTC GTGCTCAAGG TGCTCGGGGC GACGCGGATG
CGGCTGCTCG GCGCCTACGC CCTCGAATAC GGGGTGCTCG GCCTCGCCAC CGCCCTGTTC
GGCCTCGCCG CCGGCACGCT CGCCGCCTTC GTCATCGTCA CCCAGGTGAT GCGGATCGAT
TTCCGGCTCG ATCTCTCCGG GGCGCTCCTC GCCTGCGCCC TCGCGGTGGT GGTGGCGGTC
GGTCTCGGGC TCGCCGGGAC CTTCAGGATC CTCGGTCAGA AGCCGGCGCC TTACTTACGA
AATCTGTGA
|
|---|
| Protein sequence | MHGSLPPLSA PGRRPAVPSR LPLILRLALR ELRGGLGGFA VFLACLAIGV AAISGVASVS
RSLTRGLAEQ GRTILGGDLA FGLIHREASP AERAVLEAKG RVSVVAFTRA MAVAGEKGAA
LVELKAVGPD YPSSGDLVTA PALPRETLLA ERDGAFGAAV DPALLARLDL KIGDRVTVGS
ATIALRAVLQ AEPDKIANGI GFGPRLLTSE AALRASGLLQ PGSLNRWVYR VRLADPSDAE
VERAADAVRA ALPEAGWEIR SRLNADPRFA RSVERFTQFL TLVGLTALMV GGVGVANAVR
GFVERKRASI ATLKSLGAPG GQVVALYLTQ VMLIAAIGIA IGLAVGTALP YGLVLAFADL
LPVPLTPTLA PGELAVASLY GFLTALAFAI GPLGRAHDVA VSGLFRDTVD PERRWPRPRY
LVVLGLALAG LVALALLTAF DRRVALIFIV AAGLAFGLLR GVALALMALA RRLPRPRGAA
PRLALANLHR PGALTPSIVL SLGLGITLLV ALSLIDASIT RTLTRSLPSR APSLFFLDIP
GRDAAAFDQF LGGEAPRGKI ERAPMMRGRI VALNGRPASE IKAPEDAAWV LDGDRGITYA
QDLPDGSRVT EGAWWNPEQA ATPLVSFDDQ LGRALGLKVG DSVTVNVLGR NLTVKIANLR
HVEWRTLGIN FVMVFSPGTF RGAPHADLAT LTLPEGPDPA LEARILREAA LRFPSVTSVR
VKDALDAVND IVGKLVFAIR GASGVALVAS LFVLAGALAA GHRARLYDAV VLKVLGATRM
RLLGAYALEY GVLGLATALF GLAAGTLAAF VIVTQVMRID FRLDLSGALL ACALAVVVAV
GLGLAGTFRI LGQKPAPYLR NL
|
|---|
| |