Gene M446_5450 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_5450 
Symbol 
ID6132572 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp5982644 
End bp5983249 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content80% 
IMG OID641645584 
Product4-diphosphocytidyl-2C-methyl-D-erythritol synthase 
Protein accessionYP_001772200 
Protein GI170743545 
COG category[R] General function prediction only 
COG ID[COG2068] Uncharacterized MobA-related protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.15982 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCCCGC CGGTCGGCCT CGTGCTGCTC GCGGCCGGCC GCGGCACCCG CTTCGGCCCG 
GCGCCCAAGC TGCTGGCGCC GCTCGACGGG GTGCCCCTGG TGCGCCACGC CGCCGAGGCG
GCCCTGCGCG CCGGGATCGG GCCGGTCGTC GCGGTGTTCG GCCACGCCGA GGAGGCGGTG
CGCGCGGCGC TCGCCGGCCT CGACCTCGTC CTCGTGCGCA ATCCCGCCTA CGCGCAGGGG
CTGTCGACCT CCCTGCGGGC CGGGCTCGCG GCCCTGCCGG AGGCGGCGGA GGGCGCGATC
ATCCTGCTCG GGGACATGCC GCGCGTGCCC CCGGCGCTGC TGGCCGGCCT CGCGGCGGCC
TTCGCGGGGA CCGACGCGGC CGTGGTGCCG GTCTGCGCCG GGCGGCGCGG CAACCCGGTG
CTCCTCAACC GCCGCCGGCT CGCGGCGGAG CTCGCGGCGC TCGCCGGGGA CCGGGGCGCG
GGGCCGCTCC TCGCCGGGCG GAGGGACGTG CGGGAATGGC CGGTCGAGGA GGCCGGAATC
CTCCTCGACG TCGACACGCC CGAGGCCCTC GCCGGCCTCG CGCGATCCCC GAACGATCCG
CTCTGA
 
Protein sequence
MSPPVGLVLL AAGRGTRFGP APKLLAPLDG VPLVRHAAEA ALRAGIGPVV AVFGHAEEAV 
RAALAGLDLV LVRNPAYAQG LSTSLRAGLA ALPEAAEGAI ILLGDMPRVP PALLAGLAAA
FAGTDAAVVP VCAGRRGNPV LLNRRRLAAE LAALAGDRGA GPLLAGRRDV REWPVEEAGI
LLDVDTPEAL AGLARSPNDP L