Gene M446_5414 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_5414 
Symbol 
ID6134935 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp5948012 
End bp5948587 
Gene Length576 bp 
Protein Length191 aa 
Translation table11 
GC content66% 
IMG OID641645548 
ProductLuxR family transcriptional regulator 
Protein accessionYP_001772164 
Protein GI170743509 
COG category[K] Transcription 
COG ID[COG2771] DNA-binding HTH domain-containing proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTAGTCG GGACGCCTCT TCTGAAGGCG CTTGACCGTA TATGCTGCGG TGGCGTCGTC 
ATTTCGACGA GCGGTAAGGT TCTGGCCGTC AATGAGGTCG CCCGGAAGAT ATTGGATCAG
GAGACGCGCA GCGTCATCGG ACTGCATTTC GACTGCGATA TCAGCGGGCG CGACGCCATA
AAGCAGCTGC TGTCGCGCGG CAAGACACGG GTGCAACTTG AAAGTGAGAG CTGGGTGCTG
ATTGATCGCC CAGGCCAGCG TCCGCTGATC ATGCACGCGA CGCCCGTTCC GGTGCTCGGG
GAGGATGGGC CGCACTCGGT GCTGATCCTG GTGGACCTCG ACGACAGCAC CCGCCCGAGC
ACGGCGGCCC TGGAGCGGAT CTTCGGACTC ACGCCCGCCG AGGCGCGCCT CGCGGTGAAG
CTCACGCGCG GCGACACGCT GGCCGAGATC GCCGAGCAGC ACGGCCTGAG CGTCCACACG
GTGCGCACCC AGCTCGCCGC CGTCTTCAGC AAGACGAATA CCAGCCGGCA GGCCGAGCTG
GTCGCGCTGG CCCTGCGCCT GTCGATCCTG CCCTGA
 
Protein sequence
MLVGTPLLKA LDRICCGGVV ISTSGKVLAV NEVARKILDQ ETRSVIGLHF DCDISGRDAI 
KQLLSRGKTR VQLESESWVL IDRPGQRPLI MHATPVPVLG EDGPHSVLIL VDLDDSTRPS
TAALERIFGL TPAEARLAVK LTRGDTLAEI AEQHGLSVHT VRTQLAAVFS KTNTSRQAEL
VALALRLSIL P