Gene M446_5250 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_5250 
Symbol 
ID6135752 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp5768334 
End bp5769203 
Gene Length870 bp 
Protein Length289 aa 
Translation table11 
GC content77% 
IMG OID641645385 
ProductOHCU decarboxylase 
Protein accessionYP_001772008 
Protein GI170743353 
COG category[R] General function prediction only
[S] Function unknown 
COG ID[COG2351] Transthyretin-like protein
[COG3195] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR02962] hydroxyisourate hydrolase
[TIGR03164] OHCU decarboxylase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00421596 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGAGGACGA CGCTCGACGT CCTCAACGCC GCCCCGCCGG AGGTCTTCGC CGCCTTCGCG 
GGGGACCTGT TCGAGGGGGC GTCCTGGGTG GGGGAGCGGG CCGCGGCGGC CCGCCCCTTC
GCGACGGTGG CGGCCCTGGA CGCCGCCCTG GCGCAGGCCA TCCGCGCCGC CGACCCGGAG
GCGCAGCGCG CCCTGGTGCG CGGCTTCCCC GACCTCGCCG GGTCCGGGGC GCTCGCGCCC
GAGTCCGCCG CCGAGCACGC GGGGGCGGGC CTCGACCGGC TGGCAGGGGC GGAGGCCGAG
GCCTTCGCGC GCCTCAACGC CGCCTACCGG GCGCGGTTCG GCTTCCCCTT CGTGCTCTGC
GTCCGCCGCC GCAGCCTCGA CGCCATCCTG GACGGGTTCG AGGCGCGGCT CGCCCGCGCG
CCGGAGGCGG AACTCGCCGC GGCGCTGACC GAGATCGGCC ACATCGCGCG GCTGCGCCTC
GTGGACCGGG TCGACGGGCC GGGCCCGCCC CCGACCACCG GCAAGCTCTC GACCCACGTC
CTCGACACGC ATGGCGGGCG GCCCGCCGCC GGGGTCGCCC TGCGCTTCTA CGCGCTCGGC
CGCGCCGGCC GCACCCTGCT CGACACCCGC ACCACCAACG CGGACGGCCG CACCGACACG
CCGCTCCTCT CGGGGGCGCC CCTGCGGGTC GGGCGCTACG AGATCGAGTT CGACATCGGC
CCCTATTTCC GGGAGCGGGT CGCCCGCTCC GTGGACACCC TCTTCCTGGA GACGGTGCCG
ATCCGCTTCG GCATCGACGA GCCGGAGGGC CATTACCACG TGGCGATGAT CGCGACGCCG
TGGAGCTACA CGGTGTATCG CGGCAGCTGA
 
Protein sequence
MRTTLDVLNA APPEVFAAFA GDLFEGASWV GERAAAARPF ATVAALDAAL AQAIRAADPE 
AQRALVRGFP DLAGSGALAP ESAAEHAGAG LDRLAGAEAE AFARLNAAYR ARFGFPFVLC
VRRRSLDAIL DGFEARLARA PEAELAAALT EIGHIARLRL VDRVDGPGPP PTTGKLSTHV
LDTHGGRPAA GVALRFYALG RAGRTLLDTR TTNADGRTDT PLLSGAPLRV GRYEIEFDIG
PYFRERVARS VDTLFLETVP IRFGIDEPEG HYHVAMIATP WSYTVYRGS