| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | M446_5048 |
|---|
| Symbol | |
|---|
| ID | 6134776 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium sp. 4-46 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010511 |
|---|
| Strand | - |
|---|
| Start bp | 5529477 |
|---|
| End bp | 5530637 |
|---|
| Gene Length | 1161 bp |
|---|
| Protein Length | 386 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 641645184 |
|---|
| Product | patatin |
|---|
| Protein accession | YP_001771809 |
|---|
| Protein GI | 170743154 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1752] Predicted esterase of the alpha-beta hydrolase superfamily |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.00837426 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGACCGACA CGCTCGACAG AACCCGCCTC TCCGTCGCCT CCGCCGGCGC CGCCGGCGCC
GCCTCCGCCG GCCCCGTCGG GGCCGATCCG GTCGGCGTCG AGGCCGCCCG CGATCCCGGG
AGCCGCCCGG ACGCGTCGCC CGGCCGGCGC CTCGCGGGGC CGCGGGCCGA GAAGGGCATC
GCCCTCGCCC TGCAGGGCGG CGGCGCCCAC GGCGCCTTCA CGTGGGGCGT GCTCGACGCC
CTGATCGAGG ACGGCCGCCT CGCCTTCGAG GCGATCACCG GGGCGAGCGC CGGGGCGATG
AACGCCGTGG TGATGACGCA TGGCTGGCTG AAGGACGGGC CCGAGGGCGC GCGGGCGCAG
CTCGAAGCCT TCTGGCGGGA GGTGAGCCTC GACGGCGACC TGCCGCACAG CCAGCAGCGC
GCCTTCGACG GCATGCTGCG CCTGTGGCGG CGCACCCCGC TCGCCGAGGT CTGGGCGAGC
CTCGCCAGCC CCTACGCGGC CAATCCGCTC AACATCAACC CGCTCAAGCG GGCGCTGACC
GACACGGTGG ATTTCGAGGC GCTGCGCCGC GAGAACGCGC CGCCGCTCTT CATCTCGGCC
ACCAATGTCT GGACGGGCAA GATCGCGGTC TTCGAGGGCC GCGACCTGAC GGCCGACCAC
GTCATGGCCT CGGCCTGCCT GCCGACCGTG TTCCAGGCGG TGGAGATCGA CGGCGTGCCC
TACTGGGACG GGGGCTATCT CGGCAACCCG CCCCTCTACC CCCTCTATCA CGGGGCCGAG
ACCCGCGACA TCCTGCTGAT CCAGATCAAC CCGGTCGAGC GGCGCGAGAC GCCGCGCACG
CCCCAGGAGA TACGCGACCG CCTGAACGAG ATCACCTTCA ACGGCAATCT CCTGCGGGAA
TTGCGGGCGA TCGACTTCGT GCAGGGATTG GTCGACGAGG GGGCGCTGGC GACCGAGGGC
TACCGGCCGC TGCGGCTGCA CCGGATCGAC GGCAGCGGCG AACTCGACGA CTACACCGCG
GCGACGAAGC TCAAGGCGCA GTGGCCGTTC CTCTTGCGCC TGCGCGACGC CGGGCGCGCG
GCCGCGCGGG CGTGGCTCGA CCAGCATTTC GACGCGGTCG GGCGCGAGAG CAGCCTCGAC
CTGCGCGCCA TGTACGGGTG A
|
|---|
| Protein sequence | MTDTLDRTRL SVASAGAAGA ASAGPVGADP VGVEAARDPG SRPDASPGRR LAGPRAEKGI
ALALQGGGAH GAFTWGVLDA LIEDGRLAFE AITGASAGAM NAVVMTHGWL KDGPEGARAQ
LEAFWREVSL DGDLPHSQQR AFDGMLRLWR RTPLAEVWAS LASPYAANPL NINPLKRALT
DTVDFEALRR ENAPPLFISA TNVWTGKIAV FEGRDLTADH VMASACLPTV FQAVEIDGVP
YWDGGYLGNP PLYPLYHGAE TRDILLIQIN PVERRETPRT PQEIRDRLNE ITFNGNLLRE
LRAIDFVQGL VDEGALATEG YRPLRLHRID GSGELDDYTA ATKLKAQWPF LLRLRDAGRA
AARAWLDQHF DAVGRESSLD LRAMYG
|
|---|
| |