Gene M446_4976 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_4976 
Symbol 
ID6131678 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp5455976 
End bp5457082 
Gene Length1107 bp 
Protein Length368 aa 
Translation table11 
GC content67% 
IMG OID641645112 
Productpolysaccharide deacetylase 
Protein accessionYP_001771738 
Protein GI170743083 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0726] Predicted xylanase/chitin deacetylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTTCTCAT TCCCGGACTT CGCGCGCGAG ATCGAGCGGA CGGCCATCGA CGTGACGTGG 
CGGTCCGGCC TGTCTCGCCT GTTCGTCCGA AATTTCGCCG GACGCGGCGC CGTGTACATG
TTTCACAGCG TCGTGCCCGA CCGGGCGAGA TTCCTGACGC CCGGCCTGCG GGCGAGCCCG
CGCTTCGTCG ACCGCTTCCT GGCCGATCTG CGACGACGCG ACATCGACAT CATCAGGATC
GAGGACCTCG AAGACAGGCT GAGATCTCCG AATTCCCGCA GGTTCATCGT CTTCACGTTC
GACGACGGCT ACGTCGACAA CCTCCAATAT GCGCTTCCGG TGTTTGAGAA GCACCGTGCT
CCGATGACGA TCTACGTCAC AACCAGCATG ATCACCGGCG AGCTCTACTG CTGGTGGCTC
GCACTGGAGC GCCTCATACT CGAGACATCG CGCGTCGACA TCGCCCCGAT GGGGCGGCGA
TTCGTGTGCG CCACGATGGG CGACAAGCTT CGCGCCTACC GGGAGATCTC CACCTGGGTC
TCGGACGACA TCACCGGACG AGCGCCGCTT CTGCAGCCCC TCTTCCTGGT CTCCGGCGTG
TCGACCCGAC AGATCGTCGA GAATGTCGGG CTGTCCGTCG AACAGCTCAA ATATCTCGGC
CGGAACGATC TGGTCACCAT CGGCGGCCAC ACCGACCGGC ACGCCGAGCT CTCGCGGTTG
GGCGAGAGCG AGGCCCGCGC CGAGATCGTG GCGAACAAGC GCTATCTGGA GGACACCCTT
CAGAACGAGG TCTCGCACTT CGCCTTCCCG TTCGGGGGCA GGACGGCCTG CGGCGAGCGG
GAAGCCCGGC TCGTGCGGGA GGCGGGGTAC CGGACCGCCG TCACGACCGA GCACGGCTGC
GTCTTCGATC GACACCTCGG TCGCCTTCAC CTCCTCCCGC GGATCGGATC GTCGCGGCAC
TACGAATCCG TCAGCCTCGC TCACCTGCAG ACCGACGGGG CGCTCGCGGC CCTGAGGACC
TGGGCCCGGA ACGGCGCGCG GTGGCGGGCG GCCGCCCCGA GGGCCTCGCA CGGCTTCGGG
ACCGGAACGG GGCAAGGGTC GTTCTGA
 
Protein sequence
MFSFPDFARE IERTAIDVTW RSGLSRLFVR NFAGRGAVYM FHSVVPDRAR FLTPGLRASP 
RFVDRFLADL RRRDIDIIRI EDLEDRLRSP NSRRFIVFTF DDGYVDNLQY ALPVFEKHRA
PMTIYVTTSM ITGELYCWWL ALERLILETS RVDIAPMGRR FVCATMGDKL RAYREISTWV
SDDITGRAPL LQPLFLVSGV STRQIVENVG LSVEQLKYLG RNDLVTIGGH TDRHAELSRL
GESEARAEIV ANKRYLEDTL QNEVSHFAFP FGGRTACGER EARLVREAGY RTAVTTEHGC
VFDRHLGRLH LLPRIGSSRH YESVSLAHLQ TDGALAALRT WARNGARWRA AAPRASHGFG
TGTGQGSF