Gene M446_4878 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_4878 
Symbol 
ID6132972 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp5357587 
End bp5358270 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content80% 
IMG OID641645014 
ProductHhH-GPD family protein 
Protein accessionYP_001771641 
Protein GI170742986 
COG category[L] Replication, recombination and repair 
COG ID[COG0122] 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.537085 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0724165 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGGCC CCCGCGTCGA TGCCGGCGGG CCGCCGACGC GGCTCCTCGA CTCGGAGGCC 
GTGCTGCGGG AGGGGGTCGC GGCGCTGACC CGGTGCGACC CGCTGATGGC GCGCCTCGTG
GCGGAGGGGG CGACCCCGCC CCTGCGCAAG CGCCCGCCGG GCTACGAGGG GCTCGCCGGC
ATCATCGTGG CCCAGCAGCT CTCGACGGCG AGCGCGGGCG CGATCTGGGG CCGGCTCAGG
GCGCTGCTGC GGGACGTGAC CCCCGAGACC GTCGCGGCGG CGGCCGAGGC GGACCTCAGG
GCCGCCGGCC TGTCCGGGCC GAAGATCCGC ACCCTGCGGG CGGTGGCGGA GGCGGTCGCG
GCGGGCGACC TGCCGCTCCC CGCGCTCCAC ACCCTGCCGG CCGACGAGGC GCATCGCCGG
ATGGTGGCGG TGCGCGGCAT CGGGCCCTGG ACCGCGGACG TCTACCTGCT GTTCTGCCTC
GGCCACCCGG ACGCCTTCCC GGCGGGCGAC CTCGCGCTCC AGGAGGCGGC GCGGCTGGCG
GAGGGGCTCG ACGCGCGCCC GAGTGCCGCG GCGCTCGCCG CGCGGGCGCA GGCGTGGCGG
CCCTGGCGCG GGGTCGCCGC CAAGGTGCTC TGGGCGTATT ACCGCGTGGC CAAGGCGCGC
GACGGCGCGC CCCTCGCTCC CTGA
 
Protein sequence
MAGPRVDAGG PPTRLLDSEA VLREGVAALT RCDPLMARLV AEGATPPLRK RPPGYEGLAG 
IIVAQQLSTA SAGAIWGRLR ALLRDVTPET VAAAAEADLR AAGLSGPKIR TLRAVAEAVA
AGDLPLPALH TLPADEAHRR MVAVRGIGPW TADVYLLFCL GHPDAFPAGD LALQEAARLA
EGLDARPSAA ALAARAQAWR PWRGVAAKVL WAYYRVAKAR DGAPLAP