Gene M446_4820 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_4820 
Symbol 
ID6131251 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp5296712 
End bp5297839 
Gene Length1128 bp 
Protein Length375 aa 
Translation table11 
GC content76% 
IMG OID641644957 
Productputative acyl-CoA dehydrogenase 
Protein accessionYP_001771584 
Protein GI170742929 
COG category[I] Lipid transport and metabolism 
COG ID[COG1960] Acyl-CoA dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0078002 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCTGCGGG TGATGACGAT GCAGGCGGAG CCGGACGGCC CCGCCGCGAT CGAGACCATG 
CTGGCGGCGC TTCGCCGCGC CGCCGACCGC GACCTCGTTC CCCTCGTGCG CCGCATCGAC
GAGGAGGGCC TCTACCCGGA GGCGGCCCTG CGCGCCTTCG GGGCTGCCGG GGCCTACGCG
GCGCATCTCC CGGCCGGCGG GCCGCGGGGT GCGGCGCATC TGGGCGGCGC CATCCAGGCC
GTGGCGGAGG CCGGCGAGCA CTGCCTCACC GCCGCCTACT GCATGACCTG CCAGGCCGCC
CTCGCCTTCG TGATCGCCTG CAGCCACAAT GCCGAGCTGC GCGACGGCCT CGGGCCGCGC
GTCGCCGCGG GCACGGTGCT CGGCGGCGTC GGCCTCGCCA ACCCGATCAA GACCTATCTG
GGCCTGGAGC GCATCGCCCT CGACGGCGCC CGCGCGGCCG GGGGCTACCG GGTGAGCGGG
ACGCTGCCCT TCGTCTCGAA TCTCGGTCCC GATCACGTCT TCGCCGCGGT CTTCGCCCGG
CCGGAGGGGC GTACGGCCAT GGCGGTGATG CGCTGCGGCG CCGAGGGGCT GCGCCTCGGC
GAGCCGGGCC GCTTCCTCGC CCTCGGCGGC GCCCGGACCC GGGCGGTGGA GTTCCGCGAC
GTCTTCGTGC CCGACGAGGA CCTGCTCGCC GATCCCCTCG AGGGCTTCTA CAAGCGCGTC
CGGGCGGCGG TGCTCCTGCT CCAGATCGGC ATGGCGATCG GCCTCGTGCG CGGCTCCCTG
CGCCTGATGT GCGACGTCGC CCGCGTGCTG GCGCCGGCGA ACCGCGCCCT CGACGTCCAG
CCCCGCGAGG TCTCCGACCG GCTCGACGCC CTGGAGGACG AGGTCGACCG CCTCGCCGCC
ACGCCCTTCG AGACCGATCC GGCCTACTGG CGCCGCGTGC TGGAGGCGCG GCTGGCGGCG
AGCGAACTCG CCCTCTGCGC GGCGCAGAAC GCGCTCCTGC ATTGCGGGAC GGCGGGCCTG
CTCGTCGGGG CCGGGGCGCA GCGCCGCCTG CGCGAGGCGT GCTTCCTGGC GGTGGCGACG
CCGGCGATCA AGCACCTCAA GCGGATGCTG GCCGAGTTGC AGCACTAG
 
Protein sequence
MLRVMTMQAE PDGPAAIETM LAALRRAADR DLVPLVRRID EEGLYPEAAL RAFGAAGAYA 
AHLPAGGPRG AAHLGGAIQA VAEAGEHCLT AAYCMTCQAA LAFVIACSHN AELRDGLGPR
VAAGTVLGGV GLANPIKTYL GLERIALDGA RAAGGYRVSG TLPFVSNLGP DHVFAAVFAR
PEGRTAMAVM RCGAEGLRLG EPGRFLALGG ARTRAVEFRD VFVPDEDLLA DPLEGFYKRV
RAAVLLLQIG MAIGLVRGSL RLMCDVARVL APANRALDVQ PREVSDRLDA LEDEVDRLAA
TPFETDPAYW RRVLEARLAA SELALCAAQN ALLHCGTAGL LVGAGAQRRL REACFLAVAT
PAIKHLKRML AELQH