Gene M446_4777 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_4777 
Symbol 
ID6130061 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp5252658 
End bp5253365 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content78% 
IMG OID641644914 
Productribose 5-phosphate isomerase 
Protein accessionYP_001771541 
Protein GI170742886 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0120] Ribose 5-phosphate isomerase 
TIGRFAM ID[TIGR00021] ribose 5-phosphate isomerase 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.485303 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.318905 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCGCCG CCCTCAAGCG CGCGGCCGCC GCCAGGGCGC TCGACCTCGT CGCGGACGGG 
ATGCGCCTCG GCCTCGGCAC CGGCTCCACC GCGGCCGAAT TCGTCGAGCT GCTGGGCGCG
CGGGTGCGGG CCGGGCTCTC GGTCGTCGGG GTGCCGACCT CGGAGGCCAC GCACCGGGCC
GCGCAGGCGG CGGGCATCCC CCTCACCACC CTCGACGAGA CCCCCGAACT CGACCTGACC
ATCGACGGCG CCGACGAGAT CGACGGGGCG CGCCGCCTCA TCAAGGGCGG CGGCGGCGCG
CTGCTGCGCG AGAAGATCGT GGCGGCGGCG AGCCGGCGCA TGGTCGTGAT CGCGGATGCG
GGCAAGCGGG TCGAGACGCT CGGGCGCTTC CCGCTGCCGG TCGAGGTGGT CCCCTTCGGC
CTCGCCGCCA CGCGGCGCGC CGTGGAGGGC GCCCTCGGCC GCGCCGGCTG CGCGGGCGAG
GTCGCGCTGC GCCGGGCCGC GGACGGCGCG CCCTTCGTCA CCGACGGCGC CCACCTGATC
CTCGACGCGC ATCTCGGCCG CATCCCGGAT CCCGAGGCCC TGGCCGCCGC GCTCGCGGCC
GTCCCCGGCG TGGTCGAGCA CGGCCTGTTC CTCGGCCTGT GCAGCGGCGC CATCCTGGCC
GCCGATGAGG CGGGCGAGGT GCGCCTCCTG ACCCTCGGCA CCCTCTGA
 
Protein sequence
MSAALKRAAA ARALDLVADG MRLGLGTGST AAEFVELLGA RVRAGLSVVG VPTSEATHRA 
AQAAGIPLTT LDETPELDLT IDGADEIDGA RRLIKGGGGA LLREKIVAAA SRRMVVIADA
GKRVETLGRF PLPVEVVPFG LAATRRAVEG ALGRAGCAGE VALRRAADGA PFVTDGAHLI
LDAHLGRIPD PEALAAALAA VPGVVEHGLF LGLCSGAILA ADEAGEVRLL TLGTL