Gene M446_4759 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_4759 
Symbol 
ID6134790 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp5232535 
End bp5233800 
Gene Length1266 bp 
Protein Length421 aa 
Translation table11 
GC content68% 
IMG OID641644896 
Productextracellular ligand-binding receptor 
Protein accessionYP_001771523 
Protein GI170742868 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGTCGC ACGTCTCGCG CCGCCGCAGC GGCGGGCTCC TGGCCTCCAC GCTGCTGGCC 
ACCACGCTCC TCGGCGCGGC CCTGGCCGCG CCGGCCGACG CCGCCGATCC CATCCGCATC
GGCATCATCG CGGAGGCCCA GGCGCTCGCC GGCGCCTCGA TCCCGCAGGC CGCCCAGCTC
GCCGCCGACG AGATCAACGC CAAGGGCGGC GTCGACGGGC GCAAGATCGA ACTCGTCACC
TACGACGACA AGAGCTCGGC CGCCGACGCG GTCCGGGCCT TCCAGCGCGC CGCCAGCGAG
GACAAGGTCC ACGCGGTCAT CGCCAGCTAC ATCAGCGAGG TCGTGCTCGC CCTCCAGCCC
TGGTCGGCCC GGCTGAAGAT GCCCTTCATC ACCCCGGGCG CCGCCTCGAA CGACATTCCC
CTCAACGTCC ACAAGGATTA CGCCCGCAAC AAGTACTCCT TCCACGGCTA CCTCACCTCC
AAGGCGCTCT CGCAATCGGT CTGCGACGCC GCCAAGGCGA TCCTGGTCGA GGGCCGCAAG
ATGAGGACGG CCGTCATCAT GAGCGAGGAC GCCGCCTGGA CGAAGCCCCT CGACGCCGGA
TACGAGGAAT GCCTGCCGGT CGCCGGGCTC AAGGTGCTCG ACCACATCCG GTTCTCGCCG
AGCACGACCG ATTTCAGCCC GATCTTCAGC CGCATCGAGG GCGCCAAGCC GGACGTGATC
ATCACCGGCA TCTCCCATGT CGGCGTGCAG CCGACCGTGC AGTGGAAGAG CCAGCAGGTG
CCGATCCCCA TGCTCGGCAT CTCCTCGCAG GCCACCAACG CCACCTTCTG GAAGGAGACC
AACGGCGCCG CCGAGGGCGT GCTGTTCCAG ATGTTCGCGG CGCCCGGGAC CACCGTCACG
CCCAAGACCG CCCCCTTCGC CGACGCCTTC AAGGCCCGGT ACGGCAATTA CCCGAGCTAT
GCCGGCTACA CGACCTACGA CGAGGTCTAC TACATCGCCG ACGCCGTGAA GCGGGCCGGC
TCGACCGATC CCGACAAGCT CGTGGACGCG CTGGAGAAGA CCGACTGGGA AGGCACGATG
GGCCGCGTCC AGTTCTACGG CAAGGACGAC GACTTCACCC ACTCGGTGAA GTACGGGCCG
GGCCTGATCT CCGGCATGAT GATGCAATGG CTCGACGGCC GGCAGACCGC CGTGTGGCCC
GCAACGGTGG CCAACGGCAA GCTGACCTTT CCCGCCTTCG TGAAGGCGGG TGCGCCTGCC
GAATGA
 
Protein sequence
MSSHVSRRRS GGLLASTLLA TTLLGAALAA PADAADPIRI GIIAEAQALA GASIPQAAQL 
AADEINAKGG VDGRKIELVT YDDKSSAADA VRAFQRAASE DKVHAVIASY ISEVVLALQP
WSARLKMPFI TPGAASNDIP LNVHKDYARN KYSFHGYLTS KALSQSVCDA AKAILVEGRK
MRTAVIMSED AAWTKPLDAG YEECLPVAGL KVLDHIRFSP STTDFSPIFS RIEGAKPDVI
ITGISHVGVQ PTVQWKSQQV PIPMLGISSQ ATNATFWKET NGAAEGVLFQ MFAAPGTTVT
PKTAPFADAF KARYGNYPSY AGYTTYDEVY YIADAVKRAG STDPDKLVDA LEKTDWEGTM
GRVQFYGKDD DFTHSVKYGP GLISGMMMQW LDGRQTAVWP ATVANGKLTF PAFVKAGAPA
E