| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | M446_4752 |
|---|
| Symbol | |
|---|
| ID | 6134733 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium sp. 4-46 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010511 |
|---|
| Strand | + |
|---|
| Start bp | 5225201 |
|---|
| End bp | 5226118 |
|---|
| Gene Length | 918 bp |
|---|
| Protein Length | 305 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 641644889 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_001771516 |
|---|
| Protein GI | 170742861 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.222249 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGACGC TGCGACAGAT CGAGGTCGCC CGGGCCATCA TGGTCTCCGG GACGATCGCC
GGGGCGGCCC GGCTCCTCAA CGTCTCGGCG CCCGGCATCA GCCGCCTGAT GAAGTACACC
GAGGCCGCGC TCGGCATGCG GCTGTTCGAC CGCCAGGGCG GCCGCCTCGT CCCCTCGCAG
CAGGCGCGCG CCGTCTTCGA CCAGATCAAC GCCGTCTACG ACAGGGTCGA GGATCTCCGC
TACGTCGTGG CCCGCACGCA GAGCGGCAGC GGCCAGGAGC TGCTGATCGG CTCGGTGCCG
TCCATCTGCC ACGTCATGGT GCCCCGCGCG GTGGAGCGCC TGCGCGCCAA GCACCCGCAG
CTGCTCATCG ACATCAACAT CCTCAAGCTC GAGGAGGCGA TCGACTACCT GCTGCTCGGC
AAGGGGGAGG TGGTGGCGAT GAGCTACCGG CTCGACCATC CGGGCCTCGC CTTCGAGCCC
CTCGCCCGCG GCAGCCTGCT CTGCATCGTG CCCGAATCCC ATCCCCTCGC CGGGCGCGAC
GCGATCGAGG CGCGGGAGAT CGTCCGCTAC CCGCTGATCG GGATCGACCC CAACGACCCC
TACGGGCGCG TCATGGCCGA CATCTTCCGG GAGCGGCGCC TCGCCTACGA GATCACCATC
CGGGCGCGCT TCGGCACCAC GGTCTGCGCC CTGGTCCGGG CCGGCCTCGG CATCGCGGTG
ATCGACCAGT TCACCATCGC GGAGGGCGCC TTCCCGGGCA TCCGGGTCCT GCGCATCGCC
GAGGCCCCGA CCTTCCAGAC CTGGACCGCC ACCAAGGCCG GCAGCAGCCC GAGCCTGTTC
GCCTCGAACT TCGTGAGCCT CCTGCGCCAG GAGATGACGC GCGAGGCGGA AGGGGCCGCC
GGGCCCGGCG GACCGTAA
|
|---|
| Protein sequence | MLTLRQIEVA RAIMVSGTIA GAARLLNVSA PGISRLMKYT EAALGMRLFD RQGGRLVPSQ
QARAVFDQIN AVYDRVEDLR YVVARTQSGS GQELLIGSVP SICHVMVPRA VERLRAKHPQ
LLIDINILKL EEAIDYLLLG KGEVVAMSYR LDHPGLAFEP LARGSLLCIV PESHPLAGRD
AIEAREIVRY PLIGIDPNDP YGRVMADIFR ERRLAYEITI RARFGTTVCA LVRAGLGIAV
IDQFTIAEGA FPGIRVLRIA EAPTFQTWTA TKAGSSPSLF ASNFVSLLRQ EMTREAEGAA
GPGGP
|
|---|
| |