Gene M446_4487 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_4487 
Symbol 
ID6131759 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp4940402 
End bp4941118 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content73% 
IMG OID641644627 
Productpolar amino acid ABC transporter, inner membrane subunit 
Protein accessionYP_001771262 
Protein GI170742607 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4160] ABC-type arginine/histidine transport system, permease component 
TIGRFAM ID[TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.131954 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0234327 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCGACC TCGCCTTCCT GCAGGCGACC CTCGTCGCCC TGTCGCGCGG CCTGCCGCTC 
ACGCTCGGCC TCACCGCCGG GTCGCTCGCC TGCGGGGCGG TGCTGGCGCT GCTCGCGGCG
GCGGCGCGCC TCTCCGGCAT CGGGCCCCTG AGCCTCCTGT CCCGCGCCTA CGTCTTCGTG
TTCCGCGGCA CGCCGCTCCT GGTGCAGCTC TTCCTGATCT ATTACGGGCT CGGCCAGTTC
CGGCAGGACC TGCAGGCCCT GAACCTGTGG TGGTTCTTCC GGGAGCCGTA TTGGTGCGCG
CTGTTCGCGC TCAGCCTCAA CACCGGCGCC TACACGGCCG AGATCGTCCG GGGCGGGGTG
CTGGCGGTGC CGCACGGGGC GCTCCTCGCC GGGCGCGCCT GCGGCATGTC GCGGCTGACG
CTGCTGTCCC GCGTCACCCT GCCGCTGGCG GCGAGGCAGG CCCTGCCGGC CTACGGCAAC
GAGGTCATCC TGGTGGTCAA GTCGACGGCG CTCGCCTCCA CCATCACCAT CATGGAGGTG
ACCGGCATCG CCCAGAAGCT CATCGCCCAG AGCTTCCGGG CGTTGGAGAT CTTCTGCTGC
GCCGCCGCCT TCTACCTCGC CGCCGTGAGC GCGATCATCG CCCTCGTGCG CCTCGCCGAG
GCGCGGCTCG CGCCCGACCT GCGCGCGCGG CCCGCCGCGC TGCCGCGCCC CGCCTGA
 
Protein sequence
MIDLAFLQAT LVALSRGLPL TLGLTAGSLA CGAVLALLAA AARLSGIGPL SLLSRAYVFV 
FRGTPLLVQL FLIYYGLGQF RQDLQALNLW WFFREPYWCA LFALSLNTGA YTAEIVRGGV
LAVPHGALLA GRACGMSRLT LLSRVTLPLA ARQALPAYGN EVILVVKSTA LASTITIMEV
TGIAQKLIAQ SFRALEIFCC AAAFYLAAVS AIIALVRLAE ARLAPDLRAR PAALPRPA