Gene M446_4485 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_4485 
Symbol 
ID6131757 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp4938774 
End bp4939688 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content70% 
IMG OID641644625 
Productextracellular solute-binding protein 
Protein accessionYP_001771260 
Protein GI170742605 
COG category[E] Amino acid transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 
TIGRFAM ID[TIGR01096] lysine-arginine-ornithine-binding periplasmic protein 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.218316 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0251052 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGACCT TCCCGTCCGC CCCCTCGCTC CGGCCGCACC TCGCCCGGGT GGCCCTTGCC 
CGGGCGGCCC TTGCCCTGGC GGCCCTGGCC GTCGCGGCGC TCGGGACGCC GCGTCCCGCC
GCCGCCGAGG ATACGGTGCC GGCCGTGGTC CGCATCGCCA CCGAGGGCGC CTACGCGCCC
TACAATTTCA CCAAGCCGGA CGGCAGCCTC GACGGCTACG AGATCGAGCT CGCCCGCGAG
ATCTGCAAGC GCGCCAAGCT CACCTGCGAG TTCGTCGTGC AGGATTGGGA CGGCGTGGTA
CCGGGCCTGC AGGCCAAGAA GTTCGACGCC ATCATGTCGG GCATGACCAT CACCGAGGCG
CGCCAGAAGG TGATCGACTT CACGCGCCCC TACAGCGGCG ACTTCTCGGG GCTCGCGGTC
GACGCCGACG GTCCCCTGGC CAAGCTCCCG CTCGGCGACC AGAAGCTCAG CCTCGCCACC
GACGAGGCGC AGGCCCAGAA GGCCATCGAC GCCATCAAGC CGCTGCTCAA GGGCAAGACC
ATCGGGGCGC AGGTCTCGAC CATCCACGCC AACTTCCTCG ACAAATATCT GAAGGGCACC
GTCGAGATCC GCGAGTACAA GACCACCGAG CAGCACGACC TCGACCTCGC GGCCGGGCGG
ATCGACGGGA TCTTGGCCAA CGACGCGGTG CTGCGCGCCA CCGCCGAGAA GCCCGAATTC
AAGGGCAGCA TCGTGCTGGC CGGTCCGCGC TTCCGCGGCG GCATCCTGGG CCGCGGCGTG
GCGATGGGCC TGCGCAAGGG CGAGGCGGCG CTCAAGGCCC GGCTCGACGA GGGCATCGGC
GCGGTGATCG CCGACGGCAC CCTGAAGACC CTCTCGATCA AGTGGTTCAA GGTCGACATG
ACCCCCTCCG AGTGA
 
Protein sequence
MPTFPSAPSL RPHLARVALA RAALALAALA VAALGTPRPA AAEDTVPAVV RIATEGAYAP 
YNFTKPDGSL DGYEIELARE ICKRAKLTCE FVVQDWDGVV PGLQAKKFDA IMSGMTITEA
RQKVIDFTRP YSGDFSGLAV DADGPLAKLP LGDQKLSLAT DEAQAQKAID AIKPLLKGKT
IGAQVSTIHA NFLDKYLKGT VEIREYKTTE QHDLDLAAGR IDGILANDAV LRATAEKPEF
KGSIVLAGPR FRGGILGRGV AMGLRKGEAA LKARLDEGIG AVIADGTLKT LSIKWFKVDM
TPSE