| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | M446_4479 |
|---|
| Symbol | |
|---|
| ID | 6135545 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium sp. 4-46 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010511 |
|---|
| Strand | - |
|---|
| Start bp | 4930149 |
|---|
| End bp | 4930574 |
|---|
| Gene Length | 426 bp |
|---|
| Protein Length | 141 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 641644619 |
|---|
| Product | thioesterase superfamily protein |
|---|
| Protein accession | YP_001771254 |
|---|
| Protein GI | 170742599 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG2050] Uncharacterized protein, possibly involved in aromatic compounds catabolism |
|---|
| TIGRFAM ID | [TIGR00369] uncharacterized domain 1 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.306751 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.00370817 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGACC TCGACCCCTC CCAGGGCTGG CATCCCTTCA CGGATCCCGG CTTCGTCGAC
CTCGTCGGCC CGATCTTCGT GCGCGAGGGC GAGGGGCCGG CCTCCTACGC GTTCCGGGCC
GAGCCCAAGC ACGCCAACCT GATCGGGGTC GTGCAGGGCG GGATGCTGAT GACCTTCGCG
GACCGGGCGC TCGGCGTGAC CGCGATGGCG GCGGCCGAGG GCGCGAACTG CGTCACCGTG
CAGTTCGAGA TGCAGTTCAT CGCGGCCCTG CGCATCGGCG AGGTGGCGAC GCTGGTGCCG
CAGGTCGTCC AGCGCACCGG CACCCTGGTC TTCCTGCGCG GCGACGTGAC GAGCCGGGGC
CGGGTCGCGG CGACCTGCAC GGGCGTGTGG AAGATCCTGC GGCGGCGGCC CGATCCGGCC
AGCTGA
|
|---|
| Protein sequence | MSDLDPSQGW HPFTDPGFVD LVGPIFVREG EGPASYAFRA EPKHANLIGV VQGGMLMTFA
DRALGVTAMA AAEGANCVTV QFEMQFIAAL RIGEVATLVP QVVQRTGTLV FLRGDVTSRG
RVAATCTGVW KILRRRPDPA S
|
|---|
| |