Gene M446_4239 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_4239 
Symbol 
ID6129983 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp4676960 
End bp4677892 
Gene Length933 bp 
Protein Length310 aa 
Translation table11 
GC content77% 
IMG OID641644383 
Productmethionyl-tRNA formyltransferase 
Protein accessionYP_001771022 
Protein GI170742367 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0223] Methionyl-tRNA formyltransferase 
TIGRFAM ID[TIGR00460] methionyl-tRNA formyltransferase 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.856785 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00163892 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGTCCCTCA AGGTCGTCTT CATGGGCACC CCGGACTTCG CGGTGCCGAC GCTCGCCGAG 
ATCGTGGGGG GCGGGCACGA GGTCGTGGCG GTCTACACGC GCGCGCCGGC TCCGGCCGGC
CGCGGCATGG CGCTCAGGCC CTCGCCCGTC CAGGCCCTCG CCGAGCGCTT CGGCCTGCCC
GTGCTGACGC CCTCGACCCT GCGCGGCCCC GAGGCCGCCG AGACCTTCCG GGCCCACGGG
GCGGACGTCG CCGTGGTGGT CGCCTACGGG ATGATCCTGC CGCCGGCGAT CCTGGACGCG
CCGCCCCTCG GCTGCCTCAA CCTCCACGCC TCGATCCTGC CGCGCTGGCG CGGCGCGGCG
CCGATCCAGC GGGCCGTGAT GGCGGGCGAC GCGGAGACCG GCGTCGCCGT GATGCGCATG
GAGCCGGGCC TCGATACCGG CCCGGTCGCC ATGCTGGAGC GCGTCGCCAT CTCCCCCGAA
ATGACCGCGG GCGACCTCCA CGACCGGCTG ATGCCGCTCG GCGCCGACCT GATGCACCGG
GCGCTCGGGG CGCTCGAGCG CGGCGGACTC ACCTTCACGC CCCAGCCCGC CGAGGGCGTC
GTCTACGCGC ACAAGATCAC CAACGAGGAG GCGCGGCTCG ACTGGACCGC GCCGGCCGCC
CGCCTGCACG ACCGGGTCCG CGGGCTCTCG CCCTTCCCGG GCGCCTTCTT CCTCGCCGAT
CTCGGGCGCG GGCCGGAGCG CGTGAAGGTG CTGCGCGCGC GCAGCGCCGA GGGTTCGGGG
GCGCCGGGCA CGCTGCTCGA CGAGGCCGGC ACGGTCGCCT GCGGCGAGGG CGCGCTGCGG
CTCCTGCGGG TGCAGCCCGC CGGCAAGGCG GCGATGGAGG CGGCCGACTT CCTGCGCGGC
CGGCGCCTGG AGCCGGGCAC CCGCCTCGCC TGA
 
Protein sequence
MSLKVVFMGT PDFAVPTLAE IVGGGHEVVA VYTRAPAPAG RGMALRPSPV QALAERFGLP 
VLTPSTLRGP EAAETFRAHG ADVAVVVAYG MILPPAILDA PPLGCLNLHA SILPRWRGAA
PIQRAVMAGD AETGVAVMRM EPGLDTGPVA MLERVAISPE MTAGDLHDRL MPLGADLMHR
ALGALERGGL TFTPQPAEGV VYAHKITNEE ARLDWTAPAA RLHDRVRGLS PFPGAFFLAD
LGRGPERVKV LRARSAEGSG APGTLLDEAG TVACGEGALR LLRVQPAGKA AMEAADFLRG
RRLEPGTRLA