Gene M446_4170 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_4170 
Symbol 
ID6135760 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp4606393 
End bp4607499 
Gene Length1107 bp 
Protein Length368 aa 
Translation table11 
GC content56% 
IMG OID641644316 
ProductLacI family transcription regulator 
Protein accessionYP_001770956 
Protein GI170742301 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1879] ABC-type sugar transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGCCGCC CTACTATTGC CGATGTGGCC AAGGCTGCCA ATGTCAGCGT ATCAACAGTC 
GATCGTGTCC TGAAGCGCCG CCATCCCGTG CGGGAGGAAA CCGCCGAGCT GGTACAACGT
GCCGCGGAGG CCGTCGGCTA TCATCTCGCT CAGACGGTCC GTCGCAGCGG CGAACAGGAT
CGGCCTGTCC GCACCCTCGG CTTCCTTCTC CAGCGGAGAA ACGAGTTTTA CGACACACTG
GGGAAGCTCC TGCAGGAGAC AACGGCTGCC TCGACGACCA TCAGAGGCCG GTCGATGCTG
AAGTTCCGGG ACTACCAGGA GGAGGAGGTC GTCGCGGAAC GCCTCGTCCA GCTTGGGCGG
ACATGCGATG CCGTGGCTGT CGTCGCCGCA GATCACCCAC AGCTGACCGA GGCCATCGAC
ATTTTGCACG AGAAAGGCGT GCCTGTATTC GCGTTAATTT CCGAGCTCAC GGCGCCGAAT
CGTGCCGGCT ACATAGGACT GGACTATTGG ATGGTCGGCA AAACCGCGGC CTGGTTCCTC
TCCAATATGT GCAGGACGCC GGGAAAGATC GCCATTTATG TAGGGAATCA TCGCTTCCAG
AGCGAAATTG CCAGCGAAAT GAGTTTACGT TCGTATTTCC GTGAATATGC GAGGGATTTT
CAGTTACTCG AGTCGGTGGT AACCCTCGAT GAAGACGACA TAGCTTATAA ATATACAATT
AATTTATTAA GAGAGACGCA GGATCTAGTT GGCATTTACG TCGCTGGCGG CGGCATCAAC
GGCGTCATCC GGGCGTGCCG TGAGGACCCG AGCACCTCGT CCCGAAACCT CATGATTATT
GTAATGGAAG GGACTCAAGA GGCGGCTAAA GCACTCCTTA CCGGTGAGAT CAAAGTGATC
CTGGCGCACC CAAAGAAATT GTTAGCTGAC ACCCTGGTCG AAGCGATGGC GAAATCAACG
ATGATTAACC AAGGCGCCTA CTACGTGCAT CCTAGAATTC AGTTCGATAT ACGGACACAA
GCAAATTGGA TTCCTGAATC TGAGTTGCTG AAGCCGTATA AGCCCGGGCT TCCATGGCGG
AGGGACATAC CACGGAACCC GACATAG
 
Protein sequence
MRRPTIADVA KAANVSVSTV DRVLKRRHPV REETAELVQR AAEAVGYHLA QTVRRSGEQD 
RPVRTLGFLL QRRNEFYDTL GKLLQETTAA STTIRGRSML KFRDYQEEEV VAERLVQLGR
TCDAVAVVAA DHPQLTEAID ILHEKGVPVF ALISELTAPN RAGYIGLDYW MVGKTAAWFL
SNMCRTPGKI AIYVGNHRFQ SEIASEMSLR SYFREYARDF QLLESVVTLD EDDIAYKYTI
NLLRETQDLV GIYVAGGGIN GVIRACREDP STSSRNLMII VMEGTQEAAK ALLTGEIKVI
LAHPKKLLAD TLVEAMAKST MINQGAYYVH PRIQFDIRTQ ANWIPESELL KPYKPGLPWR
RDIPRNPT