Gene M446_3893 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_3893 
Symbol 
ID6133601 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp4340196 
End bp4341101 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content69% 
IMG OID641644054 
ProductLysR family transcriptional regulator 
Protein accessionYP_001770696 
Protein GI170742041 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.811179 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGACT TCGACTGGAA CGACCTGCGG GCCTTTCTGG CGGTTGCCCG GGCAGGGCGG 
CTGACGGTCG CCGCGCAGCG CATGGGGATT GATCACTCGA CCCTGAGCCG CCGCCTCTCC
GCCCTGGAGA GCGCCCTCGG TACGCGCCTG TTCGGACGCC GCCCGTCAGG CTTCGTCCTG
ACCAGTGACG GCGAGCGGCT GCTCGGCGAT GCGGAGCGGA TCGAGAGCGT GGCGATCACC
CTGCGCGCGC GCCTGGACGA GGCCTCTCAC CAGGTGAGTG GCACCGTGCG GGTCGGCACA
CCCGAGGCCT TCGGAACCAC CTTCCTCGCG CCACGCCTCG CCCAGCTCTT CGCCGCCCAG
CCGGCGCTCG AGATCGAACT CGTGGCCAAT CCGCGGAGCT TCAGCCTGTC GAAGCGCGAA
GCCGATCTCG CCGTCACCCT GACTCGACCG GAGACCGGCC GGCTCTTCGC CCGCAAACTC
GTCGATTACG CGCTCGGCCT CTACGCGGCG CGCAGCTACG CGGAGGCTGC GGAGGCGATC
CGCACGGTGG ACGACCTGCA TCGCCACCGC TGGGTCGGGT ACGTCGAGGA TCTGCTCTGG
ACGAGCGAAC TCAACTATCT CCCACAGGTC TCGTCCGCGA TCCACCCGCA GGCGCGGATC
TCGAATGTCA TTACTCAGAT GGAGGCGGTG CGCGGGGGAG CGGGCCTTGG CATCCTGCCG
CACTTCCTGG CCCGCGGCCA CCCGGACCTC ATCGCCGTCC TTCCGCAGGA GGTGCGGATC
GTTCGGGCCT ACTGGCTCAT CGCTCATGCG GATACTCGCG ACCTTCCGCG AGTCAGGCTG
GTCTCGGAGT TCCTGACTCG GCAGGCCGAG GCCGCTGGCG ATGCCTTCTG GCTGGCCGCA
CCATAG
 
Protein sequence
MSDFDWNDLR AFLAVARAGR LTVAAQRMGI DHSTLSRRLS ALESALGTRL FGRRPSGFVL 
TSDGERLLGD AERIESVAIT LRARLDEASH QVSGTVRVGT PEAFGTTFLA PRLAQLFAAQ
PALEIELVAN PRSFSLSKRE ADLAVTLTRP ETGRLFARKL VDYALGLYAA RSYAEAAEAI
RTVDDLHRHR WVGYVEDLLW TSELNYLPQV SSAIHPQARI SNVITQMEAV RGGAGLGILP
HFLARGHPDL IAVLPQEVRI VRAYWLIAHA DTRDLPRVRL VSEFLTRQAE AAGDAFWLAA
P