Gene M446_3857 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_3857 
Symbol 
ID6131996 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp4303090 
End bp4303923 
Gene Length834 bp 
Protein Length277 aa 
Translation table11 
GC content68% 
IMG OID641644022 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_001770664 
Protein GI170742009 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1176] ABC-type spermidine/putrescine transport system, permease component I 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones56 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCCACG CCATCGACAC GCGGGCCGCC GTGCTGCTGC TCGCCCCGCT CGTCCTCGTG 
ATGCTGGCGT TCTTTCTGTT CCCGACGCTG ACCATCGCCT GGACGAGCGT CGGGGGAGCC
GCGCTCGACC CGACAGCCTA CCGCGAGATG GCCACGAGCA CCCTCATCCG GCGGGTGCTC
TCGGCCACGT TCGAGATCAG CCTGGAGGCC ACGGCGGCGA GCCTCGTCCT CGGCTACGCC
ATGGCGATAT ACTTGATGCG GCAACCGCCG CGCCGCCGCG CCCTCCTGAT GATCCTGGTG
ATGCTGCCGT TCTGGACCAG CATCCTGGTG AAGAGCTTCG CCTTCACGAT CGTCCTCGGC
GATGCCGGGC TCGTCAATAC GGCACTCCGC TGGATCTCGG GCGGGGCGGT CTCGGTCTCG
ATGCTGTTCA ACCGCGTCGG CGTGCTGCTC GGGATGATGA ACTTCCTGCT GCCGTTCATG
GTCCTGCCGA TCTTCGCGAA CCTCCTCGCG CAGGATCCGG CCCTGCGCCG CGCGGCGGAG
ACAATGGGGG CGGGGCCGGT GCGCATCTTC TGGCGCATCA CGCTCCCGCT CAGCCTGCCG
GGCGTGCTGT CGGGCGTGAT CATGTCGTTC GCCCTGTCCG TGGGGTCCTA CATCACGCCG
GCCCTGCTCG GCGGGCGCAC CGACATGATG ATGGCCAACC TCATCGACTT CTACACGCGC
CAGACCCTCG ACTGGCCAAT GGCGTCCGCG GTCGCGATGG TGCTGCTCGC CATCACGGGC
GCGATGGTGC TGCTCCTCAC GCGCGTTCGC CGTGGCGACG CCGCGATCCT GTGA
 
Protein sequence
MSHAIDTRAA VLLLAPLVLV MLAFFLFPTL TIAWTSVGGA ALDPTAYREM ATSTLIRRVL 
SATFEISLEA TAASLVLGYA MAIYLMRQPP RRRALLMILV MLPFWTSILV KSFAFTIVLG
DAGLVNTALR WISGGAVSVS MLFNRVGVLL GMMNFLLPFM VLPIFANLLA QDPALRRAAE
TMGAGPVRIF WRITLPLSLP GVLSGVIMSF ALSVGSYITP ALLGGRTDMM MANLIDFYTR
QTLDWPMASA VAMVLLAITG AMVLLLTRVR RGDAAIL