Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | M446_3756 |
Symbol | |
ID | 6129794 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium sp. 4-46 |
Kingdom | Bacteria |
Replicon accession | NC_010511 |
Strand | - |
Start bp | 4194313 |
End bp | 4195620 |
Gene Length | 1308 bp |
Protein Length | 435 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 641643926 |
Product | HlyD family secretion protein |
Protein accession | YP_001770570 |
Protein GI | 170741915 |
COG category | [V] Defense mechanisms |
COG ID | [COG1566] Multidrug resistance efflux pump |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.229051 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.0155871 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGTGCCG CCCCCCTGCC CGCCGCGGCG CCGGAGGAGG AGGAGCCGGC CGAGGCCGCC CCGCCCCCGC GGCCCGCCGC GCCGCTGCTC GCCGAGACGA TCGACCTGCG GCAGAACCGG ACCACGCTGT TCGCCACGCT CCTCGTCGGC GCCACGGTCT GCGCCACCCT CGGCGGCCTC TGGTTCGGGC GCTTCGCCCA GACCGAGAGC GTGCGCGGCG TGGTCGCGGC GACCGGCGGC TTCGTGCGCC TCGACGCGCC GCGCGCCGGC GTGGTCAGCC GCCTCGCCGT GACGCAGGGC GACCGGGTCG CGGCCGGCAG CCCGGTCTAC GCCCTGCGCC TCGGCGCCGC GACCGCGGGC GGGGAATCGG TGGCGGAGGC CGAGATCCGC AACCTGCTCC AGACGCGCCG GACCCAGGAG GCCGAGGCGG CGGCCGCGGA GGCCTTCATC GCCCAGGCGA CGCGCCAGCA GAAGGCGATC GAATCGGATC AGTCCCGCTT CTACGCCGGC CTCGACGCCC AGTCCCGCCA GGTCGCCGCC GCCGCCGACA AGAGCCGCGC CATCGTGCGC CGGGTCTCCG CCTACGTGAA GGAGGGCTAC GCCACCCGCG ACGTCCTCGA GGCGCGCGAG CGGACGACCT ACGATTACGA GCGGCAGCTC GCCGAGATCG AGCTCCGGCG CCTCGAATAC CAGCGCCAGG ACACGGAGCG CCGCCGCGCC TACGAGACCC TGGTGGCCAC CAAGCAGAGC CAGAAGGCCG CCGCCCGCAG CCAGATCGAG AGCATCGACA GCCGGATCGC CGCCCTGCGG ACCGAATCGG CCCTGGAGAT CCAGGCTCCC AGCGCCGGGA CGGTGCTCGC CCTCGGGGCG AAGGTCGGCG ATTCGGTCAG GTCCGGGCAG CTCGTCGCCG CGATCGGCGA CCCGGCCGCC GCGCCCCTGA TCGTGGTCGA GGCGCCCTCC CGCGCGGTCG GCCTCGCCAA GGTCGGGCAG CGGGTGATCC TGAAATACGA CGCCTTCCCG TACAAGACCT TCGGCATCCA TCACGGCACC ATCACGTACA TCTCGGAGGC GGCCGTGCGG GCGCCGGTCA CCGAGGGGCT GCCGCCCGAG GCCGGGCTCG ATCCGCGGCC GGTGCCGATG CAATCCGCCT ACCGGATCGA GATCCGCCCC GACCGGGCGG ATGTCGACGC CTACGGCGAG AAGGTGCCGC TGAAGATCGG CGCGACCCTG TCGGTCGACA TCGTCGTCGA GCGGCGGCGC CTGATCGACT GGGCCACCGA TCCGATCCGT GCCTTGAGGG GGCGCTGA
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Protein sequence | MSAAPLPAAA PEEEEPAEAA PPPRPAAPLL AETIDLRQNR TTLFATLLVG ATVCATLGGL WFGRFAQTES VRGVVAATGG FVRLDAPRAG VVSRLAVTQG DRVAAGSPVY ALRLGAATAG GESVAEAEIR NLLQTRRTQE AEAAAAEAFI AQATRQQKAI ESDQSRFYAG LDAQSRQVAA AADKSRAIVR RVSAYVKEGY ATRDVLEARE RTTYDYERQL AEIELRRLEY QRQDTERRRA YETLVATKQS QKAAARSQIE SIDSRIAALR TESALEIQAP SAGTVLALGA KVGDSVRSGQ LVAAIGDPAA APLIVVEAPS RAVGLAKVGQ RVILKYDAFP YKTFGIHHGT ITYISEAAVR APVTEGLPPE AGLDPRPVPM QSAYRIEIRP DRADVDAYGE KVPLKIGATL SVDIVVERRR LIDWATDPIR ALRGR
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