Gene M446_3756 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_3756 
Symbol 
ID6129794 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp4194313 
End bp4195620 
Gene Length1308 bp 
Protein Length435 aa 
Translation table11 
GC content74% 
IMG OID641643926 
ProductHlyD family secretion protein 
Protein accessionYP_001770570 
Protein GI170741915 
COG category[V] Defense mechanisms 
COG ID[COG1566] Multidrug resistance efflux pump 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.229051 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0155871 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGTGCCG CCCCCCTGCC CGCCGCGGCG CCGGAGGAGG AGGAGCCGGC CGAGGCCGCC 
CCGCCCCCGC GGCCCGCCGC GCCGCTGCTC GCCGAGACGA TCGACCTGCG GCAGAACCGG
ACCACGCTGT TCGCCACGCT CCTCGTCGGC GCCACGGTCT GCGCCACCCT CGGCGGCCTC
TGGTTCGGGC GCTTCGCCCA GACCGAGAGC GTGCGCGGCG TGGTCGCGGC GACCGGCGGC
TTCGTGCGCC TCGACGCGCC GCGCGCCGGC GTGGTCAGCC GCCTCGCCGT GACGCAGGGC
GACCGGGTCG CGGCCGGCAG CCCGGTCTAC GCCCTGCGCC TCGGCGCCGC GACCGCGGGC
GGGGAATCGG TGGCGGAGGC CGAGATCCGC AACCTGCTCC AGACGCGCCG GACCCAGGAG
GCCGAGGCGG CGGCCGCGGA GGCCTTCATC GCCCAGGCGA CGCGCCAGCA GAAGGCGATC
GAATCGGATC AGTCCCGCTT CTACGCCGGC CTCGACGCCC AGTCCCGCCA GGTCGCCGCC
GCCGCCGACA AGAGCCGCGC CATCGTGCGC CGGGTCTCCG CCTACGTGAA GGAGGGCTAC
GCCACCCGCG ACGTCCTCGA GGCGCGCGAG CGGACGACCT ACGATTACGA GCGGCAGCTC
GCCGAGATCG AGCTCCGGCG CCTCGAATAC CAGCGCCAGG ACACGGAGCG CCGCCGCGCC
TACGAGACCC TGGTGGCCAC CAAGCAGAGC CAGAAGGCCG CCGCCCGCAG CCAGATCGAG
AGCATCGACA GCCGGATCGC CGCCCTGCGG ACCGAATCGG CCCTGGAGAT CCAGGCTCCC
AGCGCCGGGA CGGTGCTCGC CCTCGGGGCG AAGGTCGGCG ATTCGGTCAG GTCCGGGCAG
CTCGTCGCCG CGATCGGCGA CCCGGCCGCC GCGCCCCTGA TCGTGGTCGA GGCGCCCTCC
CGCGCGGTCG GCCTCGCCAA GGTCGGGCAG CGGGTGATCC TGAAATACGA CGCCTTCCCG
TACAAGACCT TCGGCATCCA TCACGGCACC ATCACGTACA TCTCGGAGGC GGCCGTGCGG
GCGCCGGTCA CCGAGGGGCT GCCGCCCGAG GCCGGGCTCG ATCCGCGGCC GGTGCCGATG
CAATCCGCCT ACCGGATCGA GATCCGCCCC GACCGGGCGG ATGTCGACGC CTACGGCGAG
AAGGTGCCGC TGAAGATCGG CGCGACCCTG TCGGTCGACA TCGTCGTCGA GCGGCGGCGC
CTGATCGACT GGGCCACCGA TCCGATCCGT GCCTTGAGGG GGCGCTGA
 
Protein sequence
MSAAPLPAAA PEEEEPAEAA PPPRPAAPLL AETIDLRQNR TTLFATLLVG ATVCATLGGL 
WFGRFAQTES VRGVVAATGG FVRLDAPRAG VVSRLAVTQG DRVAAGSPVY ALRLGAATAG
GESVAEAEIR NLLQTRRTQE AEAAAAEAFI AQATRQQKAI ESDQSRFYAG LDAQSRQVAA
AADKSRAIVR RVSAYVKEGY ATRDVLEARE RTTYDYERQL AEIELRRLEY QRQDTERRRA
YETLVATKQS QKAAARSQIE SIDSRIAALR TESALEIQAP SAGTVLALGA KVGDSVRSGQ
LVAAIGDPAA APLIVVEAPS RAVGLAKVGQ RVILKYDAFP YKTFGIHHGT ITYISEAAVR
APVTEGLPPE AGLDPRPVPM QSAYRIEIRP DRADVDAYGE KVPLKIGATL SVDIVVERRR
LIDWATDPIR ALRGR