Gene M446_3626 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_3626 
Symbol 
ID6134720 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp4045992 
End bp4048370 
Gene Length2379 bp 
Protein Length792 aa 
Translation table11 
GC content75% 
IMG OID641643793 
Productsignal transduction histidine kinase 
Protein accessionYP_001770441 
Protein GI170741786 
COG category[T] Signal transduction mechanisms 
COG ID[COG3920] Signal transduction histidine kinase 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0746201 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0102319 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCGGGT GCATCCGCGC CCACGCCTGG GACGCGACGC CGCTCGGGCC GCTGGCGGGC 
TGGCCGCGGG ACCTGCGCAC CACCCTTCAG CTGGTGCTCG CCATGCGCCA GCCGGCGGGC
CTCTGCTGGG GGAAGGAGGC GGCGCTGCTC TACAACGACG CCTACCGGGC GATCCTCGGC
GACAAGCATC CGGGCGCGCT CGGGGCGCCG CTGGTGCGGG TCTGGCCGGA ACTCGCCGAT
TTCCTGCGCC CGGCGGTCGA GGCGACGCTC GCCGGGACGT CCCAGCTCTG GGACGACACC
CCCTTCGACC TCTGGAGCCG CGGCGACGGC CCGCGGACCG GATGGTTCAC GGCGAGCTGG
ACCCCCGTCC GGCTGGAGAG CGGTGAGGTC GGCGGCTTCC TGATGGTGGC GGTCGAGACG
ACGGCCCGCC GGTTGGCCGA GCGCGCCCTG CGCAGGAGCG AGGAGCGCCA GGCCTTCCTG
CTGACGCTGA GCGACGCGCT GCGCGACCTC GACGACCCGG TCGCGGTGCA GCAGGCGGCC
CAGCGGGCCC TCGGGGAGCA CCTGGGCGCC GACCGGGTGG CCTACGCGGA GGATGTGGGC
GACGGCGCGC ATGTCGACCT GAAGCAGGAC TGGACCCGGG GGGGGCCCAG CATCGCCGGG
CGCTACCGCT ACGCCGATTA CGGGCGCGAG CTGATGGAGG CGCTGCGGGC GGGGCGCCCC
TGCGTGCGCC CCGACATCCA GGCCGATCCG CTGATGACGC CGGCCGAGAA GGCCGCGCAT
GCCACGCTGG GGGTCGGCGC GACGCTCTGC GTGCCCCTGG TCAAGCAGGG CCGGCTCGTG
GCGATCCTCA CGGTGCACTA TGCCGGCCCG CACGATTTCC GGCCCGACGA GGTCGCGATC
ACCGAGGAGA CGGCGGAGCG CACCTGGGCG GCGGTGGAGC GGGCCCGTGC CGAGGCGGCC
CTGCGCGGCA GCGAGGAGCG CTTCCGGCAC TTCGCCAACG CGTCCTCCGA CATCCTCTGG
ATCCGGTCGG CCGACACGCT CGCGCTGGAA TTCCTGAGTC CCGCCTTCGA GCCGATCTAC
GGCCTGCCGC GCGAGGCGGT GGCGGGCGAC CCGCGCCGCT GGGGCGCCCT GATCGTGCCG
GACGACCGCG AGGCGGCGCT GCGGCGGCTC GACGAGGTGC GGCAGGGCCG TTCGGTGACG
CACGAGTTCC GGATCCGCCG GCCGGCGGAC GGCGCCTTCC GCTGGATCCG CAGCACCGAC
TTCCCGCTCT TCGGCCCGGA GGAGCGAGTG CAGCGCCTCG CCGGCATCGC CAGCGACGTC
ACCGAGGCGA AGCAATCGGC CGAGCACCAG GCGGTGCTCC TGGCCGAGCT GCAGCACCGG
GTGCGCAACA TCATGGCGAT GATCCGCTCG GTCACGGCGC GCACGGCGGA CACCGCGATG
CACGTGCGCG ACTACGCGGA GCTCCTGTCG GGGCGGCTGA TGGCCCTCGC CCGGACCCAG
GCGCTGCTGA CCCGGGCGGC GAATCTGGGC GTGGAGGTCG ACGCGCTCGT GCGGGCCGAA
CTCGAGGCCC AGGCCCAGGA CCCGGGGCAG TACGACCTCT CCGGCCCGCC CGTGACGCTC
GCCCCCAAAG CCGCCGAGGT GCTGTCGCTG GCCGTCCACG AACTCGCGAC GAACGCCCTG
AAGCACGGGG CCCTGGCGGG GTCCCGGGGG CGGGTCGTCG CGCGCTGGCG CCTGACCCGT
CCCGACGGAC GGCCCTGGCT GCGGCTCACC TGGTCCGAGA CCCGCCCGCC CGAGCCCGAC
TGGGCGCCGC CCGCCCACCG CGGCTTCGGC ACCAGCCTGA TCGAGCAGCG GGTCCCCTAC
GAACTCGGCG GCCGCGGACG CCTCGCGGTC ACCCGCGAGG GCGCCGAGGC CAGCATCGAG
TTCCCCTTGG GGCCGGCGCC CAGTATCCTC GAAACCGACG CGCCGGTCCG CACGGGCGTC
AGCGGAGGTG CCCTCGACAT GATCGGTGAG CCCAGCCTCG TCGGGCAGCG CGTCCTGGTG
GCGGAGGACG ATTTCTTCCT CGCCAGCGAC GCGGAAGCCG CCCTGCAGGC CGCCGGTGCC
GTGGTGGTGG GACCCTTCCC GCGCGAGGAG GCCGCCCTCG CGGCCCTGCG CGCGGGCGGC
GTGACCGCCG CCGTGGTGGA CATCAACCTG GGCGCCGGCC CCTCCTTCGA GACGGCCCGC
GCGCTCTTCC AGGCCGGCAC GCCGTTCATC TTCCTCACCG GCTACGACCA AGCCGTCATC
CCGGCCGAGT TCGGGGACGT CGTGCGGCTC CAGAAACCGA TCGAGCCGCG GCACATCGTG
CGGGCGATCG CGCGGCTCGT CGAGGGCCGC CGCGGCTGA
 
Protein sequence
MGGCIRAHAW DATPLGPLAG WPRDLRTTLQ LVLAMRQPAG LCWGKEAALL YNDAYRAILG 
DKHPGALGAP LVRVWPELAD FLRPAVEATL AGTSQLWDDT PFDLWSRGDG PRTGWFTASW
TPVRLESGEV GGFLMVAVET TARRLAERAL RRSEERQAFL LTLSDALRDL DDPVAVQQAA
QRALGEHLGA DRVAYAEDVG DGAHVDLKQD WTRGGPSIAG RYRYADYGRE LMEALRAGRP
CVRPDIQADP LMTPAEKAAH ATLGVGATLC VPLVKQGRLV AILTVHYAGP HDFRPDEVAI
TEETAERTWA AVERARAEAA LRGSEERFRH FANASSDILW IRSADTLALE FLSPAFEPIY
GLPREAVAGD PRRWGALIVP DDREAALRRL DEVRQGRSVT HEFRIRRPAD GAFRWIRSTD
FPLFGPEERV QRLAGIASDV TEAKQSAEHQ AVLLAELQHR VRNIMAMIRS VTARTADTAM
HVRDYAELLS GRLMALARTQ ALLTRAANLG VEVDALVRAE LEAQAQDPGQ YDLSGPPVTL
APKAAEVLSL AVHELATNAL KHGALAGSRG RVVARWRLTR PDGRPWLRLT WSETRPPEPD
WAPPAHRGFG TSLIEQRVPY ELGGRGRLAV TREGAEASIE FPLGPAPSIL ETDAPVRTGV
SGGALDMIGE PSLVGQRVLV AEDDFFLASD AEAALQAAGA VVVGPFPREE AALAALRAGG
VTAAVVDINL GAGPSFETAR ALFQAGTPFI FLTGYDQAVI PAEFGDVVRL QKPIEPRHIV
RAIARLVEGR RG