Gene M446_3484 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_3484 
Symbol 
ID6129321 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand- 
Start bp3886693 
End bp3887367 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content72% 
IMG OID641643655 
ProductGntR family transcriptional regulator 
Protein accessionYP_001770303 
Protein GI170741648 
COG category[K] Transcription 
COG ID[COG1802] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.294371 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.809242 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAGGG TCGAGACGGG AATCAGCCGG CGCTACCTCC ACGACGAGGT GGCGGAGCGT 
CTGCGCGCGC TGATCCTCTC GGGTGAACTG GAGCCGCGGG CGCGGCTGAA CGAGATCCTG 
CTCACCGAAC GCTTCGGCAT CTCGCGCACG CCCCTGCGGG AGGCGATCAA GATCCTGGCG 
ACCGAGGGGC TCCTGGAACT GCTGCCCAAC CGCGGGGCCC GCGTCGCCAG CATCTCGACG 
CAGGAGATCG AGGAGATCCT GGAGGTGGTG GCGGCGCTCG AAGCGCTCGC GGGCGAACTC 
GCCTGCCGGC ACATCACGGA GGCCGAGCTG GAGGCGATCG CCGCCCACCA CGCGGCGATG 
GTGGAGGCGT GGCGGCGCGA GGACGATCCC GCCTACTTCA CCCTCAACCG CCGGATCCAC 
GAGGCGATCA TGGCGGCGAG CCGGAACGCC ACCCTGGCCA GCCTCTATGC GGGCCTCTCG 
GGCCGCATCC AGCGGGCGCG CTACTCGGCC CACAAGACCC CCGAGCAGTG GCGGCGCGCC 
GTCGAGGAGC ACGACGCGAT GCTGGCCCAC CTGCGCGCCC GCGACGGCGA GGCGCTGGCG 
CGCGTGATGC GCGCCCATAT CCGGGGCAAG AAGCCGGTGA TCGCGGCGGC CTACGGCAGC 
GAGGCGGGGA ATTGA
 
Protein sequence
MTRVETGISR RYLHDEVAER LRALILSGEL EPRARLNEIL LTERFGISRT PLREAIKILA 
TEGLLELLPN RGARVASIST QEIEEILEVV AALEALAGEL ACRHITEAEL EAIAAHHAAM 
VEAWRREDDP AYFTLNRRIH EAIMAASRNA TLASLYAGLS GRIQRARYSA HKTPEQWRRA 
VEEHDAMLAH LRARDGEALA RVMRAHIRGK KPVIAAAYGS EAGN