Gene M446_3481 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_3481 
Symbol 
ID6129246 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp3876981 
End bp3878144 
Gene Length1164 bp 
Protein Length387 aa 
Translation table11 
GC content71% 
IMG OID641643648 
Productmandelate racemase/muconate lactonizing protein 
Protein accessionYP_001770300 
Protein GI170741645 
COG category[M] Cell wall/membrane/envelope biogenesis
[R] General function prediction only 
COG ID[COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0353609 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.410014 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCATCG TCGACGTCCG CGAGATCACC AAGCCGATCG CCTCGCCGAT CCGCAACGCC 
TATATCGACT TCACGAAGAT GACGACGAGC CTCGTCGCGG TGGTCACCGA CGTGGTGCGC
GACGGGCGCC GGGTCGTCGG CTACGGCTTC AACTCCAACG GCCGCTACGG CCAGGGCGGG
CTGATCCGCG AGCGCTTCCG CGACCGCCTG CTGGAGGCGC CCCCCGAGAG CCTGCTGAGC
GAGGCCGGGG ACACCCTCGA CCCGCACCGG ATCTGGGCCG CGCTGATGCG CAACGAGAAG
CCCGGCGGCC ACGGCGAGCG CTCGGTGGCG GTGGGCACCC TCGACATGGC GGTCTGGGAC
GCGGCCGCGA AGATCGCCGG CAAGCCGCTC TTCCGGATGC TGGCGGAGCG GGAGGGCCGG
GAGGCCGACC CGCGCGTCTT CGTCTACGCG GCCGGGGGCT ACTACTATCC GGGCAAGGAC
GACGCGGCGC TGCGGGCGGA GATGCGCAGC TACCTCGACC GCGGCTACAC GGTCGTGAAG
ATGAAGATCG GCGGCGCCTC CCTGGCCGAG GATCGCCGCC GCATCGAGGC CGTGCTGGCC
GAGATCGGCG GTCGGGCGCG GCTCGCCGTC GACGCGAACG GGCGCTTCGA CCTCGAGACC
GCCATCGCCT ACGCCAAGAT GCTGCGGGAC TACCCGCTGT TCTGGTACGA GGAGGCGGGC
GACCCCCTCG ACTACGCCCT GCAGGCGGCG CTCGGCGGCT TCTATCCGGG GCCGATGGCG
ACGGGCGAGA ACCTCTTCTC GCACCAGGAC GCCCGCAACC TCCTGCGCTA CGGCGGGATG
CGGCCGGACC GCGACTGGCT GCAATTCGAC TGCGCCCTCG CCTACGGGCT CGTCGAGTAC
CTGCGCATCC TCGACGTGCT CGCGGAATTC GGCTGGTCGC CCGCCCGCTG CATCCCGCAT
GGCGGGCACC AGATGTCGCT CAACATCGCG GCGGGGCTCG GGCTCGGCGG GAACGAGAGC
TATCCGGACC TGTTCCAGCC CTACGGCGGC TTCCCGGACG GGGTGCGGGT CGAGGACGGG
CACATCGTCA TGCCCGACCT GCCGGGCATC GGCTTCGAGG GCAAGGCGGA GCTGATCCGG
GTGATGCGGG ACCTGGCGGA GTAG
 
Protein sequence
MRIVDVREIT KPIASPIRNA YIDFTKMTTS LVAVVTDVVR DGRRVVGYGF NSNGRYGQGG 
LIRERFRDRL LEAPPESLLS EAGDTLDPHR IWAALMRNEK PGGHGERSVA VGTLDMAVWD
AAAKIAGKPL FRMLAEREGR EADPRVFVYA AGGYYYPGKD DAALRAEMRS YLDRGYTVVK
MKIGGASLAE DRRRIEAVLA EIGGRARLAV DANGRFDLET AIAYAKMLRD YPLFWYEEAG
DPLDYALQAA LGGFYPGPMA TGENLFSHQD ARNLLRYGGM RPDRDWLQFD CALAYGLVEY
LRILDVLAEF GWSPARCIPH GGHQMSLNIA AGLGLGGNES YPDLFQPYGG FPDGVRVEDG
HIVMPDLPGI GFEGKAELIR VMRDLAE