Gene M446_3414 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_3414 
Symbol 
ID6130572 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp3788676 
End bp3789377 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content76% 
IMG OID641643586 
Producthaloacid dehalogenase, type II 
Protein accessionYP_001770238 
Protein GI170741583 
COG category[R] General function prediction only 
COG ID[COG1011] Predicted hydrolase (HAD superfamily) 
TIGRFAM ID[TIGR01428] 2-haloalkanoic acid dehalogenase, type II
[TIGR01493] Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.392985 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGTCC AGGCGCTGAT CTTCGACGTG TTCGGCACCC TGCTCGACTG GCACGGCGGG 
GTCGCCCGCG AGGCCGAGCG CCTGCTGAGG CCGCTCCGCC CGGACCTCGA CGGGAGTGCC
TTCGCGCGGG CGTGGCGGGC GCGCTACCAG CCCGGCATGG AGCCGATCCG GCAGGGAACG
CGCCCCTTCG CGGATCTCGA CGCGCTCCAC GCCGAGAGCC TGGAGGATCT GCTCGCCGCC
GAGGGCCTCG CCGGCATCCC GTCCGAGACC AAGCGCGACC TCGTCCTCGC CTGGCACCGC
CTCGACGCCT GGCCCGACGT GGCCGAGGGG CTCGCCCGCC TGCGGCCGCA CTTCCTGCTC
GCTCCCTGCT CGAACGCCCA TATCCGGCTC GCCATCGCGC ATGCGCGCCG CAACCGCCTG
CCCTGGGACG CCGTGCTCGG GGCCGAACTC GCGCGCGACT ACAAGCCGAA GCCGGCCGTG
TACCTCGCCG CCGCGCAGGC GCTGCGCCTC GCGCCGGAGG AGGTCGTGAT GGTGGCGGCC
CATTCCTCGG ACCTCGCCGC CGCGGCCGCC TGCGGGCTCG GGACCGCGCA CATCGCCCGT
CCCGACGAGA CGGGACCGGG CGGCGGCGAG GCCGGGCCGA GCGTGCCGGT GGACGTCTCC
GCGGCGGATC TCGGCGACCT CGCCCGGCAG CTCGGCTGCT GA
 
Protein sequence
MAVQALIFDV FGTLLDWHGG VAREAERLLR PLRPDLDGSA FARAWRARYQ PGMEPIRQGT 
RPFADLDALH AESLEDLLAA EGLAGIPSET KRDLVLAWHR LDAWPDVAEG LARLRPHFLL
APCSNAHIRL AIAHARRNRL PWDAVLGAEL ARDYKPKPAV YLAAAQALRL APEEVVMVAA
HSSDLAAAAA CGLGTAHIAR PDETGPGGGE AGPSVPVDVS AADLGDLARQ LGC