Gene M446_3300 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_3300 
Symbol 
ID6133854 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp3657057 
End bp3657995 
Gene Length939 bp 
Protein Length312 aa 
Translation table11 
GC content73% 
IMG OID641643487 
Productdihydrodipicolinate synthetase 
Protein accessionYP_001770139 
Protein GI170741484 
COG category[E] Amino acid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.120235 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGCTCA CGCCGTCCGC GCAGGGTGTC TACCCGATCG CCCCGACCCC GTTTCACCCG 
GACGGCAGCA TCGACGTCGC CTCGATCGAC GGGCTGACCG ACTTCTACGT GGGATGCGGC
GCGACGGGCC TGACCGTGCT CGGCGTGATG GGCGAGGCGC CCAAGCTCGA CCACGCCGAG
GGGCTCGCGG TCGCCACCCG CTTCATCCGG CGCGCCCGCG GCCTGCCGGT GATCGTCGGC
GTCTCGGCGC CGGGCTTCGC CGCGATGGCC TCGCTCGCCC GCGGCGCCAT GGAGGCCGGG
GCGGCGGGCG TGATGATCGC CCCCCCCAGC ACGCTGCGCA CCGACGACCA GATCGCGGCC
TATTATCGCC AAGCCGTCGA GGCGATCGGG CCCGACGTGC CCTTCGTGAT CCAGGATTAC
CCCCTCACCT TCTCGGTGGT GATGACGCCC GGGATCATCC GCCGGATCGT CACCGAGAAC
CCGTCCTGCG TCATGCTCAA GCACGAGGAT TGGCCCGGGC TCGAGAAGAT CTCGGCGCTG
CGGGCCTTCG AGGCGGAGGG CGCGATGCGG CCCATCTCGA TCCTGTGCGG CAATGGCGGC
CTGTTCCTCG ACTTCGAGTG CGAGCGCGGC GCCGACGGCG CCATGACCGG CTACGCCTTC
CCCGACATGC TGGTCGACGT GGTGCGGCTG TCGAAGGCGG GCGAGCGCGA CCGCGCCCAC
GACCTGTTCG ACGCGCACCT GCCGCTCCTG CGCTACGAGC AGCAGCCCGG GATCGGCCTC
GCCGTGCGCA AGTACGTGAT GGCGCGGCGC GGGCTGATCG CCTCGGACGC GCAGCGCAAG
CCCGCGGGCG GGCTCGGCCC GGCCGCGCGG GCCGAGGTCG AGTACCTGCT GGGCCGGCTC
GCCCGGCACG ATCCCCGCGC GCGGGTGCGG CCGCTCTGA
 
Protein sequence
MSLTPSAQGV YPIAPTPFHP DGSIDVASID GLTDFYVGCG ATGLTVLGVM GEAPKLDHAE 
GLAVATRFIR RARGLPVIVG VSAPGFAAMA SLARGAMEAG AAGVMIAPPS TLRTDDQIAA
YYRQAVEAIG PDVPFVIQDY PLTFSVVMTP GIIRRIVTEN PSCVMLKHED WPGLEKISAL
RAFEAEGAMR PISILCGNGG LFLDFECERG ADGAMTGYAF PDMLVDVVRL SKAGERDRAH
DLFDAHLPLL RYEQQPGIGL AVRKYVMARR GLIASDAQRK PAGGLGPAAR AEVEYLLGRL
ARHDPRARVR PL