Gene M446_3169 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_3169 
Symbol 
ID6132189 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp3506859 
End bp3508094 
Gene Length1236 bp 
Protein Length411 aa 
Translation table11 
GC content66% 
IMG OID641643357 
ProductABC transporter, periplasmic branched chain amino acid binding protein 
Protein accessionYP_001770009 
Protein GI170741354 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.268647 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAGATCGA TCGCACGCAC CGCCGCGGCC GGCATCCTGG CGCTCGCGGC CGGGGCGGCG 
CTGGCCGCGC CCGCCACCCT CAAGATCGCC TTCATCGATC CGCTGTCCGG CGGCGGCGCC
GGCACCGGCG AGGCCGGCCT CAAGACCTTC CAGTTCATGG CCGAGCGCCT CAACGCCAAC
AACCCCGACC TGAAGCTCGA AGTCCTCGGC TACGACAACA AGCTCAATCC GCAGGAGAGC
CTCGTCCAGC TTCAGAAGGC GATCGATTCC GGCGCCCGCG TCGTCGTGCA GGGCAACGGT
TCGAGCGTGG CCTCCGCCAT CGTCGACTTC GTCAACAAGT ACAACGATCG CAACCCTGGC
AAGGAGGTCG TCTACCTCAA CTACGCCGCC GTCGATCCCG TGCTGACCAA CGCGAAGTGC
AGCTACTGGC ACTTCCGGTT CGACGCCAAT TCCGACATCA AGATGGGGGC CCTGACGAAT
TTCCTGAAGG GCAAGCCCGA GGTCAAGAAG GTCTACCTGA TCAACCAGGA TTACTCGTTC
GGGCAGGCGG TGCGCAGCGC GGCGCGCGCG ATGCTGAAGG AGAAGCGTCC GGACGTGCAG
ATCGTCGGCG ACGAGGTCGC GCCGCTGCAG AAGGTCAACG ACTTCTCGCC CTACGTCGCC
AAGGTGAAAG CGTCCGGCGC CGACACGGTC ATCACCGGCA ACTGGGGCCA GGACATGGCG
CTGCTGCTCA AGGCAGCGGC CGATGCCGGG CTTCAGGCCA ATTTCTACAC GTATTACGGC
GGCGGGTCGG GATCGCCGAC CGCGATCAAG CAGACGAATC TGGCCGACCG GGTCTTCCAG
GTCGCCGAGG GCTACGCCAA CATCCCGTAC CCGGCCGGGC AGGAGTTCGA GAAGGCGTTC
CGGGCCCGGG TCGGCCAGGA GCTGACCTAT CCCCGCATCG TCAACCTGAT GAACATCCTC
GCCAAGGCCG CCGGCGAGGC GAAGTCGACC GACCCGAAGG CGATCGCGAA GGCGCTGGAA
TCCATCCACA ACGACACGCT CTACGGCCAG GACAGCTTCA TGCGGCCGGA CGACCACCAG
CTCTTCCAGC CGATCTACAT CTCGCAATTC GGCCCCGTGG ACACCGCCAA GCAATTCGAC
AGCGAGAATA CCGGCTGGGG CTGGAAGGCG GCGGGCGAGG TCAGCGCGAA GGACACGCTG
CTGCCGACCA CCTGCAAGAT GGACCGGCCG AGCTGA
 
Protein sequence
MRSIARTAAA GILALAAGAA LAAPATLKIA FIDPLSGGGA GTGEAGLKTF QFMAERLNAN 
NPDLKLEVLG YDNKLNPQES LVQLQKAIDS GARVVVQGNG SSVASAIVDF VNKYNDRNPG
KEVVYLNYAA VDPVLTNAKC SYWHFRFDAN SDIKMGALTN FLKGKPEVKK VYLINQDYSF
GQAVRSAARA MLKEKRPDVQ IVGDEVAPLQ KVNDFSPYVA KVKASGADTV ITGNWGQDMA
LLLKAAADAG LQANFYTYYG GGSGSPTAIK QTNLADRVFQ VAEGYANIPY PAGQEFEKAF
RARVGQELTY PRIVNLMNIL AKAAGEAKST DPKAIAKALE SIHNDTLYGQ DSFMRPDDHQ
LFQPIYISQF GPVDTAKQFD SENTGWGWKA AGEVSAKDTL LPTTCKMDRP S