| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | M446_3078 |
|---|
| Symbol | glgA |
|---|
| ID | 6134556 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium sp. 4-46 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010511 |
|---|
| Strand | + |
|---|
| Start bp | 3406639 |
|---|
| End bp | 3408168 |
|---|
| Gene Length | 1530 bp |
|---|
| Protein Length | 509 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 641643269 |
|---|
| Product | glycogen synthase |
|---|
| Protein accession | YP_001769922 |
|---|
| Protein GI | 170741267 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0297] Glycogen synthase |
|---|
| TIGRFAM ID | [TIGR02095] glycogen/starch synthases, ADP-glucose type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.143266 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCGGCT CGGCGTGCGC GCGCTCCGTT TCCCCTGCGC CGGTCCCGTC GTCACCATCC
CCCTTCCTCC GCAGCCCCGG CTCGCTGCGC CAGCGCATCC TCTTCGCCAC GCCCGAGATG
GCGGATTTCC TGAAGACCGG CGGCCTCGGC GAGGTGGCGG CGGCGCTGCC GCGGGCGCTG
CGCCAGCACT ACGACGTGCG CATCCTGATC CCGGGCTACC GCCAGGTCGT CGACCGCTAC
GCCGACATCC CGGTCGTCGC CCAGCTGCCG GGCCGGGACG GGCTCGCGCC CTCGGCGCTC
GGCCTCGTCG AGACCGGGGA CGGCATGCCG GTCTACGTGC TGCTCAACGC CGAGCTCTAC
GACCGGGCGG GCTCGCCCTA CGGCGACCAG GGCGGCGACT TCGCCGACAA CGACCTGCGC
TTCGCGCGCC TCAGCCTCGC CGCCGTGGAA CTCGCGAAGG GTGCCGATCC GGACTGGCAG
GCCGACCTCC TCCACCTCAA CGACTGGCAG ACGGCGCTCG CCCCCGCCTA CCTGGCCTGG
CAGGGCCTGC GGGTGCCGAG CATCCTCACC GTGCACAACC TCGCCTATCA GGGTCTGTTC
CCGCGGGAGA ATCTCGCCCG GCTCGGCGTG CCAGAGGGCG CCTTCCAGAT CGACGGCGTC
GAGTTCTACG GCAAGCTCTC CTTCCTGAAA GCGGGGCTGT TCTACGCCTC GCACGTGACG
ACGGTGAGCG AGACCTACGC GCAGGAGATC ACCTCGCCGG AATTCGGCTG CGGCCTCGAC
GGGCTGCTGC GCACCCGGGC CGGCCAGGGC CGCCTCACCG GAATCCTCAA CGGGATCGAC
GAGATCTGGG ATCCGCGGAC GGACCCCCAT CTCGCCACCG CCTTCGAGGC GGATGACTGG
AAGGGCAAGC GCGCGAACGC CGACGCGGTG CGCGAGCGCT TCGGGCTCGG CGTCTCGCGC
GGCCCGCTCT TCGCGATCGT GTCGCGGCTC GTCCACCAGA AGGGTGTCGA CCTCACGCTC
GCGGCGGCGG AAGCGATCGT GGCGGAGGGC GGCCAGCTCG TCGTCACCGG CCAGGGCGAG
CCGCGCTTCG AGAGCGCCTT CATGGACCTC GCGCGCCGTC ACCCGGGGGC GGTGGGCGTG
CGGATCGGCT TCGACGAGAC CGACGCGCAC CGGATGTTCG CGGGCAGCGA CTTCCTGCTG
ATGCCGTCGC GCTTCGAGCC CTGCGGGCTG GCCCAGATGT ACGCGCAGCG CTTCGGCTCG
CTGCCGATCG CGCGCCGGGT CGGCGGCCTC GCCGACACGG TGGAGGACGG GGTCACGGGC
TTCCTGTTCG GCGAGGCGAC GCTGAAGGGC CTCACCGGCG CGATCCGCCG CGCCCTCGAC
ACCTTCGCGT CGAAGCGCCA CCTCAACACG ATGCGGCGCA CCGCGATGGC CCGCACCTTC
GGCTGGGACA AGGCGGCGCT GAGCTACAGC GGCCTCTACG CCCGCACCAT GGGCAACGGC
GTCGAGATGC TGCGCCCGCG GGCGGCGTGA
|
|---|
| Protein sequence | MIGSACARSV SPAPVPSSPS PFLRSPGSLR QRILFATPEM ADFLKTGGLG EVAAALPRAL
RQHYDVRILI PGYRQVVDRY ADIPVVAQLP GRDGLAPSAL GLVETGDGMP VYVLLNAELY
DRAGSPYGDQ GGDFADNDLR FARLSLAAVE LAKGADPDWQ ADLLHLNDWQ TALAPAYLAW
QGLRVPSILT VHNLAYQGLF PRENLARLGV PEGAFQIDGV EFYGKLSFLK AGLFYASHVT
TVSETYAQEI TSPEFGCGLD GLLRTRAGQG RLTGILNGID EIWDPRTDPH LATAFEADDW
KGKRANADAV RERFGLGVSR GPLFAIVSRL VHQKGVDLTL AAAEAIVAEG GQLVVTGQGE
PRFESAFMDL ARRHPGAVGV RIGFDETDAH RMFAGSDFLL MPSRFEPCGL AQMYAQRFGS
LPIARRVGGL ADTVEDGVTG FLFGEATLKG LTGAIRRALD TFASKRHLNT MRRTAMARTF
GWDKAALSYS GLYARTMGNG VEMLRPRAA
|
|---|
| |