| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | M446_1958 |
|---|
| Symbol | |
|---|
| ID | 6129526 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium sp. 4-46 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010511 |
|---|
| Strand | - |
|---|
| Start bp | 2185612 |
|---|
| End bp | 2186535 |
|---|
| Gene Length | 924 bp |
|---|
| Protein Length | 307 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 641642190 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_001768858 |
|---|
| Protein GI | 170740203 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGACCGGC TCGGCCAGCT CGAACTCCTC GTGGCGATCG CCGAAGCCGG GACGATCAGC
GGCGCCGCGC AGGCGCGCGG CCTCTCGGTC GCGGCGGCGA GCCGGACGCT CGCGGCGCTG
GAGGAGCGGC TCGGCGTGCT GCTGGTGCGG CGCAACACCC GCACCCTCTC GCTCACCGAC
GAGGGCGGGA AGTTCCTGGC CCGCGCCCGC GGCATCCTCG CGGACGTCGC CGACAGCGAG
GCCGAGGTCA CCGGGGCGGC GCTCGATCCG AGCGGGCTCC TGCGGGTCAG CGCCTCGCTC
TCCTTCGGGC TGCTGCACAT CGCGCCGCTC CTGCCCGCCT ACCACGCCCG CTATCCGAAC
GTGCGCGTGC ACGTCGAAAT CTCCAACCGC TACGTGGACC TGATCGATGC CGGGATCGAC
GTCGCCATCC GCACCCGCGA GTTCGAGCCG GACCGGGCCA TCACGATCCG CCGCCTCGCC
GAGACCCGCC GCATCCTGAC GGGGGCGCCG TCCTACCTCG CCCGGGCGGG CTGTCCGGCC
CACCCGCGCG ACCTCGCGCG CCACGCCCTG CTGATCTACG TCTACGCCAA CAATCCGAAC
GAGCTGACCT TCACCCGCGG CGAGGAGACC GTGCGGGTGC CGGCCCACGG CCTGCTCGAA
TCGAACGACG GCCAGATCCT GCGCGCCGCC GCCCTCAACG GGCTCGGCCT CCTGGTCCAG
CCCACCTACA TCGTGCACGA CGACGTCGCG GCGGGACGCC TCGTGCCCGT GCTCGATGCC
TGGGACCTGC CGCGCCTGCG GATCAACTTC GCCTATCCGA CGCGCAAGCA CCTCTCGGCC
AAGGTGCGCT CCTTCATCGC GTTCATGACC GCGCATTTCG AGGCGCACGA CTTCTCCCGC
AAGTGGACCG GCCGGGCGGG ATAG
|
|---|
| Protein sequence | MDRLGQLELL VAIAEAGTIS GAAQARGLSV AAASRTLAAL EERLGVLLVR RNTRTLSLTD
EGGKFLARAR GILADVADSE AEVTGAALDP SGLLRVSASL SFGLLHIAPL LPAYHARYPN
VRVHVEISNR YVDLIDAGID VAIRTREFEP DRAITIRRLA ETRRILTGAP SYLARAGCPA
HPRDLARHAL LIYVYANNPN ELTFTRGEET VRVPAHGLLE SNDGQILRAA ALNGLGLLVQ
PTYIVHDDVA AGRLVPVLDA WDLPRLRINF AYPTRKHLSA KVRSFIAFMT AHFEAHDFSR
KWTGRAG
|
|---|
| |