Gene M446_1550 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_1550 
Symbol 
ID6129542 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp1728137 
End bp1729210 
Gene Length1074 bp 
Protein Length357 aa 
Translation table11 
GC content73% 
IMG OID641641816 
ProductNAD-dependent epimerase/dehydratase 
Protein accessionYP_001768485 
Protein GI170739830 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0451] Nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.205711 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCTCCG TCGATCTCGT CACGGGTGGA TGCGGTTTCA TCGGCCGGAA TCTGGTCGCG 
TCGCTGCTTG CCGCCGGGCG TACCGTGCGG GTGTTCGATT GCGGCGACCC GCACGGCCTT
CCGGCTTGCG TCGAGTATCG CCGCGGCTCC GTGCTCGACG AAGCCGCGCT CTCGGCCGCG
ATGAACGGGG TCGGGCAGGT CTACCATCTC GCCGGGATCC CGCACCTGTG GTCCGCCGAC
CGGGGGGCCT TCGCCCGCGT CCACGCGAAC GGGACGAGGT GCCTGCTGGC CGCCGCGCCT
GCCGCGGTGC GGGTGGTCCA TTGCTCGACC GAGGCCGTGC TGCTCACCCG ATCGCGCGAC
GTTGCGCCGG TGCGCGGGGA CGATCTCCCG CCCCTCGACC GGATGTCCGG TCCCTATACG
CGGTCGAAAT GCCTCGCCGA ACAGGCAGCG CTCGCCGCCG CGGCGGCCGG ACGCCACGTC
GTGATCGCGA GCCCCACGGT GCCGATCGGG CCCGACGACC GGAACATGAC GCCGCCCGCG
GCCATGCTGT CCCTGTTCCT GAACGGGCAT GCACCGGTCT TCCTTGATTG CACGCTGAAC
CTCGTCGACG TGCGCGACGC AGCCGAAGGG CTCCGCCTCG CGGGCGCGCG GGGGCGTCCT
GGTCAGCGCT ACGTGCTGGG CGGTGAGAAC GTTCGGCTTC GGCAACTCCT GGCCAGGCTG
GAGCATCTGT CGGGCCGGCC GATGCCGTCC GTGGCGCTCC CGGGCGGCAT CGCCATGACG
GTGGCGGCCG TGGCCGAGTG GGCCGCCGAT CACCTCACGC GACGCCCTCC GGTCGCCACG
CGCGAAGGTG TGCGCCTCGC GCGTCGCTCG GCCCCGTTCG ACGACGGCAA GGCCCGCAGG
GAACTCGGAT ACAGGCCGAG ACCGATCGAC GAAGCCCTGG CGCTGGCGGT GGCCTGGCTC
ATGAGCGGCG CGACCTCGCG CGGCGATGCG GCCGCGCCGG GCGCAGGCAC GGCTGCTCAG
GGTCACGCTC ACCCGGTTGC GCCCATCTCG CGCAACACCT CGGACGCGGC CTGA
 
Protein sequence
MPSVDLVTGG CGFIGRNLVA SLLAAGRTVR VFDCGDPHGL PACVEYRRGS VLDEAALSAA 
MNGVGQVYHL AGIPHLWSAD RGAFARVHAN GTRCLLAAAP AAVRVVHCST EAVLLTRSRD
VAPVRGDDLP PLDRMSGPYT RSKCLAEQAA LAAAAAGRHV VIASPTVPIG PDDRNMTPPA
AMLSLFLNGH APVFLDCTLN LVDVRDAAEG LRLAGARGRP GQRYVLGGEN VRLRQLLARL
EHLSGRPMPS VALPGGIAMT VAAVAEWAAD HLTRRPPVAT REGVRLARRS APFDDGKARR
ELGYRPRPID EALALAVAWL MSGATSRGDA AAPGAGTAAQ GHAHPVAPIS RNTSDAA